Journal Publications

2021

Published

  1. Abram, G., Samsel, F., Petersen, M. R., Asay-Davis, X., Comeau, D., Price, S. F., & Potel, M. (2021).  Antarctic Water Masses and Ice Shelves: Visualizing the Physics. IEEE Computer Graphics and Applications, 41(1), 35–41. https://doi.org/10.1109/MCG.2020.3044228
  2. Balaguru, K., Van Roekel, L. P., Leung, L. R., & Veneziani, M. (2021). Subtropical Eastern North Pacific SST Bias in Earth System Models. Journal of Geophysical Research: Oceans, 126(8). https://doi.org/10.1029/2021JC017359
  3. Brown, H., Liu, X., Pokhrel, R., Murphy, S., Lu, Z., Saleh, R., et al. (2021). Biomass burning aerosols in most climate models are too absorbing. Nature Communications, 12(1), 277. https://doi.org/10.1038/s41467-020-20482-9
  4. Brus, S. R., Wolfram, P. J., Van Roekel, L. P., & Meixner, J. D. (2021). Unstructured global to coastal wave modeling for the Energy Exascale Earth System Model using WAVEWATCH III version 6.07. Geoscientific Model Development, 14(5), 2917–2938. https://doi.org/10.5194/gmd-14-2917-2021
  5. Chen, C. ‐C., Richter, J. H., Liu, C., Moncrieff, M. W., Tang, Q., Lin, W., et al. (2021). Effects of Organized Convection Parameterization on the MJO and Precipitation in E3SMv1. Part I: Mesoscale Heating. Journal of Advances in Modeling Earth Systems, 13(6). https://doi.org/10.1029/2020MS002401
  6. Cui, Z., Zhang, G. J., Wang, Y., & Xie, S. (2021). Understanding the Roles of Convective Trigger Functions in the Diurnal Cycle of Precipitation in the NCAR CAM5. Journal of Climate, 1–52. https://doi.org/10.1175/JCLI-D-20-0699.1
  7. Guo, Z., Griffin, B. M., Domke, S., & Larson, V. E. (2021). A Parameterization of Turbulent Dissipation and Pressure Damping Time Scales in Stably Stratified Inversions, and its Effects on Low Clouds in Global Simulations. Journal of Advances in Modeling Earth Systems, 13(4), e2020MS002278. https://doi.org/10.1029/2020MS002278 
  8. Guo, M., Zhuang, Q., Yao, H., Golub, M., Leung, L. R., Pierson, D., & Tan, Z. (2021). Validation and Sensitivity Analysis of a 1‐D Lake Model Across Global Lakes. Journal of Geophysical Research: Atmospheres, 126(4). https://doi.org/10.1029/2020JD033417
  9. Jones, C. D., Hickman, J. E., Rumbold, S. T., Walton, J., Lamboll, R. D., Skeie, R. B., et al. (2021). The Climate Response to Emissions Reductions due to COVID‐19: Initial Results from CovidMIP. Geophysical Research Letters. https://doi.org/10.1029/2020GL091883
  10. Keeble, J., Hassler, B., Banerjee, A., Checa-Garcia, R., Chiodo, G., Davis, S., et al. (2021). Evaluating stratospheric ozone and water vapour changes in CMIP6 models from 1850 to 2100. Atmospheric Chemistry and Physics, 21(6), 5015–5061. https://doi.org/10.5194/acp-21-5015-2021
  11. Laffin, M. K., Zender, C. S., Singh, S., Van Wessem, J. M., Smeets, C. J. P. P., & Reijmer, C. H. (2021). Climatology and Evolution of the Antarctic Peninsula Föhn Wind‐Induced Melt Regime From 1979–2018. Journal of Geophysical Research: Atmospheres, 126(4). https://doi.org/10.1029/2020JD033682 
  12. Reeves Eyre, J. E. J., Zeng, X., & Zhang, K. (2021). Ocean Surface Flux Algorithm Effects on Earth System Model Energy and Water Cycles. Frontiers in Marine Science, 8, 642804. https://doi.org/10.3389/fmars.2021.642804
  13. Tan, Z., Leung, L. R., Li, H.-Y., Tesfa, T., Zhu, Q., Yang, X., et al. (2021). Increased extreme rains intensify erosional nitrogen and phosphorus fluxes to the northern Gulf of Mexico in recent decades. Environmental Research Letters, 16(5), 054080. https://doi.org/10.1088/1748-9326/abf006
  14. Tang, J., & Riley, W. J. (2021). On the modeling paradigm of plant root nutrient acquisition. Plant and Soil. https://doi.org/10.1007/s11104-020-04798-5
  15. Tang, J., Riley, W., Maschmann, G. L., & Brodie, E. L. (2021). Conceptualizing biogeochemical reactions with an Ohm’s law analogy (preprint). Microbiology. https://doi.org/10.1002/essoar.10505827.1
  16. Tang, Q., Prather, M. J., Hsu, J., Ruiz, D. J., Cameron-Smith, P. J., Xie, S., & Golaz, J.-C. (2021). Evaluation of the interactive stratospheric ozone (O3v2) module in the E3SM version 1 Earth system model. Geoscientific Model Development, 14(3), 1219–1236. https://doi.org/10.5194/gmd-14-1219-2021
  17. Tao, C., Zhang, Y., Tang, Q., Ma, H.-Y., Ghate, V. P., Tang, S., et al. (2021). Land–Atmosphere Coupling at the U.S. Southern Great Plains: A Comparison on Local Convective Regimes between ARM Observations, Reanalysis, and Climate Model Simulations. Journal of Hydrometeorology, 22(2), 463–481. https://doi.org/10.1175/JHM-D-20-0078.1
  18. Tebaldi, C., Debeire, K., Eyring, V., Fischer, E., Fyfe, J., Friedlingstein, P., et al. (2021). Climate model projections from the Scenario Model Intercomparison Project (ScenarioMIP) of CMIP6. Earth System Dynamics, 12(1), 253–293. https://doi.org/10.5194/esd-12-253-2021
  19. Thornton, P. E., Shrestha, R., Thornton, M., Kao, S.-C., Wei, Y., & Wilson, B. E. (2021). Gridded daily weather data for North America with comprehensive uncertainty quantification. Scientific Data, 8(1), 190. https://doi.org/10.1038/s41597-021-00973-0
  20. Wan, H., Zhang, S., Rasch, P. J., Larson, V. E., Zeng, X., & Yan, H. (2021). Quantifying and attributing time step sensitivities in present-day climate simulations conducted with EAMv1. Geoscientific Model Development, 14(4), 1921–1948. https://doi.org/10.5194/gmd-14-1921-2021
  21. Wang, W., Zender, C. S., van As, D., Fausto, R. S., & Laffin, M. K. (2021). Greenland Surface Melt Dominated by Solar and Sensible Heating. Geophysical Research Letters, 48(7). https://doi.org/10.1029/2020GL090653
  22. Wang, Yong (2021). Disproportionate control on aerosol burden by light rain. Nature Geoscience.  https://doi.org/10.1038/s41561-020-00675-z
  23. Wang, Y., Zhang, G. J., Xie, S., Lin, W., Craig, G. C., Tang, Q., & Ma, H.-Y. (2021). Effects of coupling a stochastic convective parameterization with the Zhang–McFarlane scheme on precipitation simulation in the DOE E3SMv1.0 atmosphere model. Geoscientific Model Development, 14(3), 1575–1593. https://doi.org/10.5194/gmd-14-1575-2021
  24. Woolway, R. I., Sharma, S., Weyhenmeyer, G. A., Debolskiy, A., Golub, M., Mercado-Bettín, D., et al. (2021). Phenological shifts in lake stratification under climate change. Nature Communications, 12(1), 2318. https://doi.org/10.1038/s41467-021-22657-4
  25. Xue, Y., Yao, T., Boone, A. A., Diallo, I., Liu, Y., Zeng, X., et al. (2021). Impact of Initialized Land Surface Temperature and Snowpack on Subseasonal to Seasonal Prediction Project, Phase I (LS4P-I): organization and experimental design. Geoscientific Model Development, 14(7), 4465–4494. https://doi.org/10.5194/gmd-14-4465-2021
  26. Zampieri, L., Kauker, F., Fröhle, J., Sumata, H., Hunke, E. C., & Goessling, H. F. (2021). Impact of Sea‐Ice Model Complexity on the Performance of an Unstructured‐Mesh Sea‐Ice/Ocean Model under Different Atmospheric Forcings. Journal of Advances in Modeling Earth Systems, 13(5). https://doi.org/10.1029/2020MS002438
  27. Zaveri, R. A., Easter, R. C., Singh, B., Wang, H., Lu, Z., Tilmes, S., et al. (2021). Development and Evaluation of Chemistry‐Aerosol‐Climate Model CAM5‐Chem‐MAM7‐MOSAIC: Global Atmospheric Distribution and Radiative Effects of Nitrate Aerosol. Journal of Advances in Modeling Earth Systems, 13(4). https://doi.org/10.1029/2020MS002346
  28. Zeng, X., Reeves Eyre, J. E. J., Dixon, R. D., & Arevalo, J. (2021). Quantifying the Occurrence of Record Hot Years Through Normalized Warming Trends. Geophysical Research Letters, 48(10). https://doi.org/10.1029/2020GL091626
  29. Zhang, T., Lin, W., Vogelmann, A. M., Zhang, M., Xie, S., Qin, Y., & Golaz, J. (2021). Improving Convection Trigger Functions in Deep Convective Parameterization Schemes Using Machine Learning. Journal of Advances in Modeling Earth Systems, 13(5). https://doi.org/10.1029/2020MS002365

Accepted/In Review

 

 

2020

Published

  1. Bailey, D. A., Holland, M. M., DuVivier, A. K., Hunke, E. C., & Turner, A. K. (2020). Impact of a New Sea Ice Thermodynamic Formulation in the CESM2 Sea Ice Component. Journal of Advances in Modeling Earth Systems, 12(11). https://doi.org/10.1029/2020MS002154
  2. Balaguru, K., Leung, L. R., Van Roekel, L., Golaz, J.-C., Ullrich, P., Caldwell, P. M., et al. (2020). Characterizing Tropical Cyclones in the Energy Exascale Earth System Model version 1. Journal of Advances in Modeling Earth Systems, n/a(n/a), e2019MS002024. https://doi.org/10.1029/2019MS002024
  3. Balaguru, K., Patricola, C. M., Hagos, S. M., Leung, L. R., & Dong, L. (2020). Enhanced predictability of eastern North Pacific tropical cyclone activity using the ENSO Longitude Index. Geophysical Research Letters, n/a(n/a), e2020GL088849. https://doi.org/10.1029/2020GL088849
  4. Bogenschutz, P. A., Tang, S., Caldwell, P. M., Xie, S., Lin, W., & Chen, Y. (2020). The E3SM version 1 Single Column Model. Geoscientific Model Development Discussions, 1–26. https://doi.org/10.5194/gmd-2020-27
  5. Burrows, S.M., Maltrud, M.E., Yang, X., Zhu, Q., Jeffery, N., Shi, X., & Ricciuto, D.M., et al. 2020. The DOE E3SM coupled model v1.1 biogeochemistry configuration: overview and evaluation of coupled carbon-climate experiments. Journal of Advances in Modeling Earth Systems. https://doi.org/10.1029/2019MS001766
  6. Butler, E. E., Chen, M., Ricciuto, D., Flores‐Moreno, H., Wythers, K. R., Kattge, J., et al. (2020). Seeing the Canopy for the Branches: Improved Within Canopy Scaling of Leaf Nitrogen. Journal of Advances in Modeling Earth Systems, 12(10). https://doi.org/10.1029/2020MS002237
  7. Chen, Y., Huang, X., Yang, P., Kuo, C., & Chen, X. (2020). Seasonal Dependent Impact of Ice Cloud Longwave Scattering on the Polar Climate. Geophysical Research Letters, 47(23). https://doi.org/10.1029/2020GL090534
  8. DeSantis, D., Wolfram, P. J., Bennett, K., & Alexandrov, B. (2020). Coarse-Grain Cluster Analysis of Tensors with Application to Climate Biome Identification. ArXiv:2001.07827 [Cs, Stat]. Retrieved from http://arxiv.org/abs/2001.07827
  9. Di Vittorio, A. V., Shi, X., Bond‐Lamberty, B., Calvin, K., & Jones, A. (2020). Initial Land Use/Cover Distribution Substantially Affects Global Carbon and Local Temperature Projections in the Integrated Earth System Model. Global Biogeochemical Cycles, 34(5), e2019GB006383. https://doi.org/10.1029/2019GB006383
  10. Di Vittorio, Alan V., Vernon, C. R., & Shu, S. (2020). Moirai Version 3: A Data Processing System to Generate Recent Historical Land Inputs for Global Modeling Applications at Various Scales. Journal of Open Research Software, 8(1), 1. https://doi.org/10.5334/jors.266
  11. Dunne, J. P., Winton, M., Bacmeister, J., Danabasoglu, G., Gettelman, A., Golaz, J., et al. (2020). Comparison of Equilibrium Climate Sensitivity Estimates From Slab Ocean, 150‐Year, and Longer Simulations. Geophysical Research Letters, 47(16). https://doi.org/10.1029/2020GL088852
  12. Golden, K. M., Bennetts, L. G., Cherkaev, E., Eisenman, I., Feltham, D., Horvat, C., et al. (2020). Modeling Sea Ice. Notices of the American Mathematical Society, 67(10), 1. . https://doi.org/10.1090/noti2171
  13. Gryspeerdt, E., Mülmenstädt, J., Gettelman, A., Malavelle, F. F., Morrison, H., Neubauer, D., et al. (2020). Surprising similarities in model and observational aerosol radiative forcing estimates. Atmospheric Chemistry and Physics, 20(1), 613–623. https://doi.org/10.5194/acp-20-613-2020
  14. Guba, O., Taylor, M. A., Bradley, A. M., Bosler, P. A., & Steyer, A. (2020). A framework to evaluate IMEX schemes for atmospheric models. Geoscientific Model Development, 13(12), 6467–6480. https://doi.org/10.5194/gmd-13-6467-2020
  15. Guo, M., Zhuang, Q., Tan, Z., Shurpali, N., Juutinen, S., Kortelainen, P., & Martikainen, P. J. (2020). Rising methane emissions from boreal lakes due to increasing ice-free days. Environmental Research Letters, 15(6), 064008. https://doi.org/10.1088/1748-9326/ab8254
  16. Guo, M., Q. Zhuang, H. Yao, M. Golub, L. R. Leung, D. Pierson, and Z. Tan (2020). Validation and sensitivity analysis of a 1‐D lake model across global lakes. Journal of Geophysical Research: Atmospheres, 125, e2020JD033417. https:doi.org/10.1029/2020JD033417
  17. Guseva, S., Bleninger, T., Jöhnk, K., Polli, B. A., Tan, Z., Thiery, W., et al. (2020). Multimodel simulation of vertical gas transfer in a temperate lake. Hydrology and Earth System Sciences, 24(2), 697–715. https://doi.org/10.5194/hess-24-697-2020
  18. Hannah, W. M., Jones, C. R., Hillman, B. R., Norman, M. R., Bader, D. C., Taylor, M. A., et al. (2020). Initial Results From the Super-Parameterized E3SM. Journal of Advances in Modeling Earth Systems, 12(1), e2019MS001863. https://doi.org/10.1029/2019MS001863
  19. Hoch, K. E., Petersen, M. R., Brus, S. R., Engwirda, D., Roberts, A. F., Rosa, K. L., & Wolfram, P. J. (2020). MPAS-Ocean Simulation Quality for Variable-Resolution North American Coastal Meshes. Journal of Advances in Modeling Earth Systems, 12(3), e2019MS001848. https://doi.org/10.1029/2019MS001848
  20. Holm, J. A., Knox, R. G., Zhu, Q., Fisher, R. A., Koven, C. D., Lima, A. J. N., et al. (2020). The Central Amazon Biomass Sink Under Current and Future Atmospheric CO2: Predictions From Big-Leaf and Demographic Vegetation Models. Journal of Geophysical Research: Biogeosciences, 125(3), e2019JG005500. https://doi.org/10.1029/2019JG005500
  21. Hsu, J. C., & Prather, M. J. (2020). Assessing Uncertainties and Approximations in Solar Heating of the Climate System. Journal of Advances in Modeling Earth Systems, 12, e2020MS002131. https://doi.org/10.1029/2020MS002131
  22. Hu, A., Van Roekel, L., Weijer, W., Garuba, O. A., Cheng, W., & Nadiga, B. T. (2020). Role of AMOC in Transient Climate Response to Greenhouse Gas Forcing in Two Coupled Models. Journal of Climate, 33(14), 5845–5859. https://doi.org/10.1175/JCLI-D-19-1027.1
  23. Hunke, E., Allard, R., Blain, P., Blockley, E., Feltham, D., Fichefet, T., et al. (2020). Should Sea-Ice Modeling Tools Designed for Climate Research Be Used for Short-Term Forecasting? Current Climate Change Reports. https://doi.org/10.1007/s40641-020-00162-y
  24. Jeffery, N., Maltrud, M. E., Hunke, E. C., Wang, S., Wolfe, J., Turner, A. K., et al. (2020). Investigating controls on sea ice algal production using E3SMv1.1-BGC. Annals of Glaciology, 1–22. https://doi.org/10.1017/aog.2020.7
  25. Jeong, H., Asay-Davis, X. S., Turner, A. K., Comeau, D. S., Price, S. F., Abernathey, R. P., et al. (2020). Impacts of Ice-Shelf Melting on Water-Mass Transformation in the Southern Ocean from E3SM Simulations. Journal of Climate, 33(13), 5787–5807. https://doi.org/10.1175/JCLI-D-19-0683.1
  26. Lee, D. Y., Lin, W., & Petersen, M. R. (2020). Wintertime Arctic Oscillation and North Atlantic Oscillation and their impacts on the Northern Hemisphere climate in E3SM. Climate Dynamics. https://doi.org/10.1007/s00382-020-05316-0
  27. Leung, L. R., Bader, D. C., Taylor, M. A., & McCoy, R. B. (2020). An Introduction to the E3SM Special Collection: Goals, Science Drivers, Development, and Analysis. Journal of Advances in Modeling Earth Systems, 12(11), e2019MS001821. https://doi.org/10.1029/2019MS001821
  28. Liao, C., Tesfa, T., Duan, Z., & Leung, L. R. (2020). Watershed delineation on a hexagonal mesh grid. Environmental Modelling & Software, 128, 104702. https://doi.org/10.1016/j.envsoft.2020.104702
  29. Lou, Sijia, Manish Shrivastava*, Richard C Easter, Yang Yang, Po-Lun Ma, Hailong Wang, Michael J Cubison, Pedro Campuzano-Jost, Jose L Jimenez, Qi Zhang, Philip J Rasch, John E Shilling, Alla Zelenyuk, Manvendra Dubey, Philip Cameron-Smith, Scot T Martin, Johannes Schneider, Christiane Schulz (2020). New SOA treatments within the Energy Exascale Earth System Model (E3SM): Strong production and sinks govern atmospheric SOA distributions and radiative forcing. Journal of Advances in Modeling Earth Systems, 12, e2020MS002266.  https://doi.org/10.1029/2020MS002266
  30. MacDonald, M., Kurowski, M. J., & Teixeira, J. (2020). Direct Numerical Simulation of the Moist Stably Stratified Surface Layer: Turbulence and Fog Formation. Boundary-Layer Meteorology, 175(3), 343–368. https://doi.org/10.1007/s10546-020-00511-2
  31. Matheou, G., Davis, A. B., & Teixeira, J. (2020). The Spiderweb Structure of Stratocumulus Clouds. Atmosphere, 11(7), 730. https://doi.org/10.3390/atmos11070730
  32. Meng, L., Mao, J., Zhou, Y., Richardson, A. D., Lee, X., Thornton, P. E., et al. (2020). Urban warming advances spring phenology but reduces the response of phenology to temperature in the conterminous United States. Proceedings of the National Academy of Sciences, 117(8), 4228–4233. https://doi.org/10.1073/pnas.1911117117
  33. Metzler, H., Zhu, Q., Riley, W., Hoyt, A., Müller, M., & Sierra, C. A. (2020). Mathematical Reconstruction of Land Carbon Models From Their Numerical Output: Computing Soil Radiocarbon From C Dynamics. Journal of Advances in Modeling Earth Systems, 12(1), e2019MS001776. https://doi.org/10.1029/2019MS001776
  34. Niu, H., Kang, S., Wang, H., Du, J., Pu, T., Zhang, G., et al. (2020). Light-absorbing impurities accelerating glacial melting in southeastern Tibetan Plateau. Environmental Pollution, 257, 113541. https://doi.org/10.1016/j.envpol.2019.113541
  35. Orbe, C., Van Roekel, L., Adames, Á. F., Dezfuli, A., Fasullo, J., Gleckler, P. J., et al. (2020). Representation of Modes of Variability in 6 U.S. Climate Models. Journal of Climate. https://doi.org/10.1175/JCLI-D-19-0956.1
  36. Rieger, L. A., Cole, J. N. S., Fyfe, J. C., Po-Chedley, S., Cameron-Smith, P. J., Durack, P. J., et al. (2020). Quantifying CanESM5 and EAMv1 sensitivities to Mt. Pinatubo volcanic forcing for the CMIP6 historical experiment. Geoscientific Model Development, 13(10), 4831–4843. https://doi.org/10.5194/gmd-13-4831-2020
  37. Shi, Z., Allison, S. D., He, Y., Levine, P. A., Hoyt, A. M., Beem-Miller, J., et al. (2020). The age distribution of global soil carbon inferred from radiocarbon measurements. Nature Geoscience. https://doi.org/10.1038/s41561-020-0596-z
  38. Skeie, R. B., Myhre, G., Hodnebrog, Ø., Cameron-Smith, P. J., Deushi, M., Hegglin, M. I., et al. (2020). Historical total ozone radiative forcing derived from CMIP6 simulations. Npj Climate and Atmospheric Science, 3(1).  https://doi.org/10.1038/s41612-020-00131-0
  39. Sockwell, K. C., Peterson, K., Kuberry, P., Bochev, P., & Trask, N. (2020). Interface Flux Recovery coupling method for the ocean–atmosphere system. Results in Applied Mathematics, 8, 100110. https://doi.org/10.1016/j.rinam.2020.100110
  40. Sun, S., Pattyn, F., Simon, E. G., Albrecht, T., Cornford, S., Calov, R., et al. (2020). Antarctic ice sheet response to sudden and sustained ice-shelf collapse (ABUMIP). Journal of Glaciology, 1–14. https://doi.org/10.1017/jog.2020.67
  41. Tan, Z., Leung, L. R., Li, H.-Y., Tesfa, T., Zhu, Q., & Huang, M. (2020). A substantial role of soil erosion in the land carbon sink and its future changes. Global Change Biology, 26(4), 2642–2655. https://doi.org/10.1111/gcb.14982
  42. Taylor, M. A., Guba, O., Steyer, A., Ullrich, P. A., Hall, D. M., & Eldrid, C. (2020). An Energy Consistent Discretization of the Nonhydrostatic Equations in Primitive Variables. Journal of Advances in Modeling Earth Systems, 12(1), e2019MS001783. https://doi.org/10.1029/2019MS001783
  43. Tesfa, T. K., Leung, L. R., & Ghan, S. J. (2020). Exploring Topography-Based Methods for Downscaling Subgrid Precipitation for Use in Earth System Models. Journal of Geophysical Research: Atmospheres, 125(5), e2019JD031456. https://doi.org/10.1029/2019JD031456
  44. Thomas, H. J. D., Bjorkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Kattge, J., Diaz, S., et al. (2020). Global plant trait relationships extend to the climatic extremes of the tundra biome. Nature Communications, 11(1), 1351. https://doi.org/10.1038/s41467-020-15014-4
  45. Vanderkelen, I., Lipzig, N. P. M. van, Lawrence, D. M., Droppers, B., Golub, M., Gosling, S. N., et al. (2020). Global Heat Uptake by Inland Waters. Geophysical Research Letters, 47(12), e2020GL087867. https://doi.org/10.1029/2020GL087867
  46. Wan, H., Woodward, C. S., Zhang, S., Vogl, C. J., Stinis, P., Gardner, D. J., et al. (2020). Improving Time Step Convergence in an Atmosphere Model With Simplified Physics: The Impacts of Closure Assumption and Process Coupling. Journal of Advances in Modeling Earth Systems, 12(10), e2019MS001982. https://doi.org/10.1029/2019MS001982
  47. Wang, H., Easter, R. C., Zhang, R., Ma, P.-L., Singh, B., Zhang, K., et al. (2020). Aerosols in the E3SM Version 1: New Developments and Their Impacts on Radiative Forcing. Journal of Advances in Modeling Earth Systems, 12(1), e2019MS001851. https://doi.org/10.1029/2019MS001851
  48. Wang, Y.-C., Xie, S., Tang, S., & Lin, W. (2020). Evaluation of an Improved Convective Triggering Function: Observational Evidence and SCM Tests. Journal of Geophysical Research: Atmospheres, 125(11), e2019JD031651. https://doi.org/10.1029/2019JD031651
  49. Wu, E., Yang, H., Kleissl, J., Suselj, K., Kurowski, M. J., & Teixeira, J. (2020). On the Parameterization of Convective Downdrafts for Marine Stratocumulus Clouds. Monthly Weather Review, 148(5), 1931–1950. https://doi.org/10.1175/MWR-D-19-0292.1
  50. Wu, M., Liu, X., Yu, H., Wang, H., Shi, Y., Yang, K., et al. (2020). Understanding Processes that Control Dust Spatial Distributions with Global Climate Models and Satellite Observations. Atmospheric Chemistry and Physics Discussions, 1–52. https://doi.org/10.5194/acp-2020-160
  51. Yang, Y., Lou, S., Wang, H., Wang, P., & Liao, H. (2020). Trends and source apportionment of aerosols in Europe during 1980–2018. Atmospheric Chemistry and Physics, 20(4), 2579–2590. https://doi.org/10.5194/acp-20-2579-2020
  52. Yu, Y., Mao, J., Thornton, P. E., Notaro, M., Wullschleger, S. D., Shi, X., et al. (2020). Quantifying the drivers and predictability of seasonal changes in African fire. Nature Communications, 11(1), 2893. https://doi.org/10.1038/s41467-020-16692-w
  53. Zhang, M., Xie, S., Liu, X., Lin, W., Zhang, K., Ma, H.-Y., et al. (2020). Toward Understanding the Simulated Phase Partitioning of Arctic Single-Layer Mixed-Phase Clouds in E3SM. Earth and Space Science, n/a(n/a), e2020EA001125. https://doi.org/10.1029/2020EA001125
  54. Zheng, X., Klein, S. A., Ghate, V. P., Santos, S., McGibbon, J., Caldwell, P., et al. (2020). Assessment of Precipitating Marine Stratocumulus Clouds in the E3SMv1 Atmosphere Model: A Case Study from the ARM MAGIC Field Campaign. Monthly Weather Review, 148(8), 3341–3359. https://doi.org/10.1175/MWR-D-19-0349.1
  55. Zhou, T., Leung, L. R., Leng, G., Voisin, N., Li, H.-Y., Craig, A. P., et al. (2020). Global Irrigation Characteristics and Effects Simulated by Fully Coupled Land Surface, River, and Water Management Models in E3SM. Journal of Advances in Modeling Earth Systems, 12(10), e2020MS002069. https://doi.org/10.1029/2020MS002069
  56. Zhu, Q., Riley, W. J., Iversen, C. M., & Kattge, J. (2020). Assessing Impacts of Plant Stoichiometric Traits on Terrestrial Ecosystem Carbon Accumulation Using the E3SM Land Model. Journal of Advances in Modeling Earth Systems, 12(4), e2019MS001841. https://doi.org/10.1029/2019MS001841

Accepted/In Review

  1. Bond-Lamberty, B., Di Vittorio, A., Jones, A. D., Shi, X., Calvin, K. V. Quantifying the variability of an integrated assessment model driven by a wide variety of earth system and agricultural models. Climatic Change.
  2. Cai, X., W. J. Riley, Z. Zeng, and J. T. Randerson (2020), Deforestation has substantially increased tropical flood risk, in review Nature Sustainability.
  3. Comeau, D., X. Asay-Davis, C. Begeman, M. Hoffman, W. Lin, M. Petersen, S. Price, A. Roberts, L. Van Roekel, M. Veneziani, J.Wolfe, J. Fyke, T. Ringler, A. Turner. Ice-shelf basal melt rates from a global Earth system model. JAMES (in review)
  4. Wolff, Z., and C. S. Zender. 2020. Improvements in Atmospheric Longwave Radiation Due to Realistic Representation of Cryospheric Surface Emissivity in Earth System Models, J. Geophys. Res. (in review after revision).

 

2019

Published

  1. Bertagna, L., Deakin, M., Guba, O., Sunderland, D., Bradley, A. M., Tezaur, I. K., et al. (2019). HOMMEXX 1.0: a performance-portable atmospheric dynamical core for the Energy Exascale Earth System Model. Geoscientific Model Development, 12(4), 1423–1441. https://doi.org/10.5194/gmd-12-1423-2019
  2. Bisht, G., & Riley, W. J. (2019). Development and Verification of a Numerical Library for Solving Global Terrestrial Multiphysics Problems. Journal of Advances in Modeling Earth Systems, 11(6), 1516–1542. https://doi.org/10.1029/2018MS001560
  3. Bosler, P. A., Bradley, A. M., & Taylor, M. A. (2019). Conservative Multimoment Transport along Characteristics for Discontinuous Galerkin Methods. SIAM Journal on Scientific Computing, 41(4), B870–B902. https://doi.org/10.1137/18M1165943
  4. Brunke, M. A., Ma, P.-L., Eyre, J. E. J. R., Rasch, P. J., Sorooshian, A., & Zeng, X. (2019). Subtropical Marine Low Stratiform Cloud Deck Spatial Errors in the E3SMv1 Atmosphere Model. Geophysical Research Letters, 46(21), 12598–12607. https://doi.org/10.1029/2019GL084747
  5. Cai, X., Riley, W. J., Zhu, Q., Tang, J., Zeng, Z., Bisht, G., & Randerson, J. T. (2019). Improving Representation of Deforestation Effects on Evapotranspiration in the E3SM Land Model. Journal of Advances in Modeling Earth Systems, 11(8), 2412–2427. https://doi.org/10.1029/2018MS001551
  6. Caldwell, P. M., Mametjanov, A., Tang, Q., Van Roekel, L. P., Golaz, J.-C., Lin, W., et al. (2019). The DOE E3SM Coupled Model Version 1: Description and Results at High Resolution. Journal of Advances in Modeling Earth Systems, 11(12), 4095–4146. https://doi.org/10.1029/2019MS001870
  7. Calvin, K., Bond-Lamberty, B., Jones, A., Shi, X., Di Vittorio, A., & Thornton, P. (2019). Characteristics of human-climate feedbacks differ at different radiative forcing levels. Global and Planetary Change, 180, 126–135. https://doi.org/10.1016/j.gloplacha.2019.06.003
  8. Chen, J., Zhu, Q., Riley, W. J., He, Y., Randerson, J. T., & Trumbore, S. (2019). Comparison With Global Soil Radiocarbon Observations Indicates Needed Carbon Cycle Improvements in the E3SM Land Model. Journal of Geophysical Research: Biogeosciences, 124(5), 1098–1114. https://doi.org/10.1029/2018JG004795
  9. Chylek, P., Lee, J. E., Romonosky, D. E., Gallo, F., Lou, S., Shrivastava, M., et al. (2019). Mie Scattering Captures Observed Optical Properties of Ambient Biomass Burning Plumes Assuming Uniform Black, Brown, and Organic Carbon Mixtures. Journal of Geophysical Research: Atmospheres, 124(21), 11406–11427. https://doi.org/10.1029/2019JD031224
  10. Dang, C., Zender, C. S., & Flanner, M. G. (2019). Intercomparison and improvement of two-stream shortwave radiative transfer schemes in Earth system models for a unified treatment of cryospheric surfaces. The Cryosphere, 13(9), 2325–2343. https://doi.org/10.5194/tc-13-2325-2019
  11. Drewniak, B. A. (2019). Simulating Dynamic Roots in the Energy Exascale Earth System Land Model. Journal of Advances in Modeling Earth Systems, 11(1), 338–359. https://doi.org/10.1029/2018MS001334
  12. Fanourgakis, G. S., Kanakidou, M., Nenes, A., Bauer, S. E., Bergman, T., Carslaw, K. S., et al. (2019). Evaluation of global simulations of aerosol particle and cloud condensation nuclei number, with implications for cloud droplet formation. Atmospheric Chemistry and Physics, 19(13), 8591–8617. https://doi.org/10.5194/acp-19-8591-2019
  13. Fleischer, K., Rammig, A., De Kauwe, M. G., Walker, A. P., Domingues, T. F., Fuchslueger, L., et al. (2019). Amazon forest response to CO 2 fertilization dependent on plant phosphorus acquisition. Nature Geoscience, 12(9), 736–741. https://doi.org/10.1038/s41561-019-0404-9
  14. Forbes, W. L., Mao, J., Ricciuto, D. M., Kao, S.-C., Shi, X., Tavakoly, A. A., et al. (2019). Streamflow in the Columbia River Basin: Quantifying Changes Over the Period 1951-2008 and Determining the Drivers of Those Changes. Water Resources Research, 55(8), 6640–6652. https://doi.org/10.1029/2018WR024256
  15. Golaz, J.-C., Caldwell, P. M., Van Roekel, L. P., Petersen, M. R., Tang, Q., Wolfe, J. D., et al. (2019). The DOE E3SM Coupled Model Version 1: Overview and Evaluation at Standard Resolution. Journal of Advances in Modeling Earth Systems, 11(7), 2089–2129. https://doi.org/10.1029/2018MS001603
  16. Gong, P., Wang, X., Pokhrel, B., Wang, H., Liu, X., Liu, X., & Wania, F. (2019). Trans-Himalayan Transport of Organochlorine Compounds: Three-Year Observations and Model-Based Flux Estimation. Environmental Science & Technology, 53(12), 6773–6783. https://doi.org/10.1021/acs.est.9b01223
  17. Hamilton, D. S., Scanza, R. A., Feng, Y., Guinness, J., Kok, J. F., Li, L., et al. (2019). Improved methodologies for Earth system modelling of atmospheric soluble iron and observation comparisons using the Mechanism of Intermediate complexity for Modelling Iron (MIMI v1.0). Geoscientific Model Development, 12(9), 3835–3862. https://doi.org/10.5194/gmd-12-3835-2019
  18. Harrop, B. E., Ma, P.-L., Rasch, P. J., Qian, Y., Lin, G., & Hannay, C. (2019). Understanding Monsoonal Water Cycle Changes in a Warmer Climate in E3SMv1 Using a Normalized Gross Moist Stability Framework. Journal of Geophysical Research: Atmospheres, 124(20), 10826–10843. https://doi.org/10.1029/2019JD031443
  19. Hoffman, M. J., Asay‐Davis, X., Price, S. F., Fyke, J., & Perego, M. (2019). Effect of Subshelf Melt Variability on Sea Level Rise Contribution From Thwaites Glacier, Antarctica. Journal of Geophysical Research: Earth Surface, 124(12), e2019JF005155. https://doi.org/10.1029/2019JF005155
  20. Ito, A., Myriokefalitakis, S., Kanakidou, M., Mahowald, N. M., Scanza, R. A., Hamilton, D. S., et al. (2019). Pyrogenic iron: The missing link to high iron solubility in aerosols. Science Advances, 5(5), eaau7671. https://doi.org/10.1126/sciadv.aau7671
  21. Jiang, T., Evans, K., Branstetter, M., Caldwell, P., Neale, R., Rasch, P. J., et al. (2019). Northern Hemisphere Blocking in ∼25-km-Resolution E3SM v0.3 Atmosphere-Land Simulations. Journal of Geophysical Research: Atmospheres, 124(5), 2465–2482. https://doi.org/10.1029/2018JD028892
  22. Kang, S., Zhang, Q., Qian, Y., Ji, Z., Li, C., Cong, Z., et al. (2019). Linking atmospheric pollution to cryospheric change in the Third Pole region: current progress and future prospects. National Science Review, 6(4), 796–809. https://doi.org/10.1093/nsr/nwz031
  23. Kurowski, M. J., Thrastarson, H. T., Suselj, K., & Teixeira, J. (2019). Towards Unifying the Planetary Boundary Layer and Shallow Convection in CAM5 with the Eddy-Diffusivity/Mass-Flux Approach. Atmosphere, 10(9), 484. https://doi.org/10.3390/atmos10090484
  24. Lawrence, D. M., Fisher, R. A., Koven, C. D., Oleson, K. W., Swenson, S. C., Bonan, G., et al. (2019). The Community Land Model Version 5: Description of New Features, Benchmarking, and Impact of Forcing Uncertainty. Journal of Advances in Modeling Earth Systems, 11(12), 4245–4287. https://doi.org/10.1029/2018MS001583
  25. Lee, D. Y., Petersen, M. R., & Lin, W. (2019). The Southern Annular Mode and Southern Ocean Surface Westerly Winds in E3SM. Earth and Space Science, 6(12), 2624–2643. https://doi.org/10.1029/2019EA000663
  26. Levine, P. A., Randerson, J. T., Chen, Y., Pritchard, M. S., Xu, M., & Hoffman, F. M. (2019). Soil Moisture Variability Intensifies and Prolongs Eastern Amazon Temperature and Carbon Cycle Response to El Niño–Southern Oscillation. Journal of Climate, 32(4), 1273–1292. https://doi.org/10.1175/JCLI-D-18-0150.1
  27. Mahajan, S., Evans, K. J., Kennedy, J. H., Xu, M., & Norman, M. R. (2019). A Multivariate Approach to Ensure Statistical Reproducibility of Climate Model Simulations. In Proceedings of the Platform for Advanced Scientific Computing Conference (pp. 1–10). Zurich, Switzerland: Association for Computing Machinery. https://doi.org/10.1145/3324989.3325724
  28. Mahajan, S., Evans, K. J., Kennedy, J. H., Xu, M., Norman, M. R., & Branstetter, M. L. (2019). Ongoing solution reproducibility of earth system models as they progress toward exascale computing. The International Journal of High Performance Computing Applications, 33(5), 784–790. https://doi.org/10.1177/1094342019837341
  29. Mao, Y., Zhou, T., Leung, L. R., Tesfa, T. K., Li, H.-Y., Wang, K., et al. (2019). Flood Inundation Generation Mechanisms and Their Changes in 1953–2004 in Global Major River Basins. Journal of Geophysical Research: Atmospheres, 124(22), 11672–11692. https://doi.org/10.1029/2019JD031381
  30. Martin, D. F., Cornford, S. L., & Payne, A. J. (2019). Millennial-Scale Vulnerability of the Antarctic Ice Sheet to Regional Ice Shelf Collapse. Geophysical Research Letters, 46(3), 1467–1475. https://doi.org/10.1029/2018GL081229
  31. Meskhidze, N., Völker, C., Al-Abadleh, H. A., Barbeau, K., Bressac, M., Buck, C., et al. (2019). Perspective on identifying and characterizing the processes controlling iron speciation and residence time at the atmosphere-ocean interface. Marine Chemistry, 217, 103704. https://doi.org/10.1016/j.marchem.2019.103704
  32. Pal, A., Mahajan, S., & Norman, M. R. (2019). Using Deep Neural Networks as Cost-Effective Surrogate Models for Super-Parameterized E3SM Radiative Transfer. Geophysical Research Letters, 46(11), 6069–6079. https://doi.org/10.1029/2018GL081646
  33. Paukert, M., Fan, J., Rasch, P. J., Morrison, H., Milbrandt, J. A., Shpund, J., & Khain, A. (2019). Three-Moment Representation of Rain in a Bulk Microphysics Model. Journal of Advances in Modeling Earth Systems, 11(1), 257–277. https://doi.org/10.1029/2018MS001512
  34. Petersen, M. R., Asay‐Davis, X. S., Berres, A. S., Chen, Q., Feige, N., Hoffman, M. J., et al. (2019). An Evaluation of the Ocean and Sea Ice Climate of E3SM Using MPAS and Interannual CORE-II Forcing. Journal of Advances in Modeling Earth Systems, 11(5), 1438–1458. https://doi.org/10.1029/2018MS001373
  35. Pouchard, L., Baldwin, S., Elsethagen, T., Jha, S., Raju, B., Stephan, E., et al. (2019). Computational reproducibility of scientific workflows at extreme scales: The International Journal of High Performance Computing Applications. https://doi.org/10.1177/1094342019839124
  36. Prather, M. J., & Hsu, J. C. (2019). A round Earth for climate models. Proceedings of the National Academy of Sciences, 116(39), 19330–19335. https://doi.org/10.1073/pnas.1908198116
  37. Rasch, P. J., Xie, S., Ma, P.-L., Lin, W., Wang, H., Tang, Q., et al. (2019). An Overview of the Atmospheric Component of the Energy Exascale Earth System Model. Journal of Advances in Modeling Earth Systems, 11(8), 2377–2411. https://doi.org/10.1029/2019MS001629
  38. Reeves Eyre, J. E. J., Van Roekel, L., Zeng, X., Brunke, M. A., & Golaz, J.-C. (2019). Ocean Barrier Layers in the Energy Exascale Earth System Model. Geophysical Research Letters, 46(14), 8234–8243. https://doi.org/10.1029/2019GL083591
  39. Richter, J. H., Chen, C.-C., Tang, Q., Xie, S., & Rasch, P. J. (2019). Improved Simulation of the QBO in E3SMv1. Journal of Advances in Modeling Earth Systems, 11(11), 3403–3418. https://doi.org/10.1029/2019MS001763
  40. Saunois, M., Stavert, A. R., Poulter, B., Bousquet, P., Canadell, J. G., Jackson, R. B., et al. (2019). The Global Methane Budget 2000-2017. Earth System Science Data Discussions, 1–136. https://doi.org/10.5194/essd-2019-128
  41. Steyer, A., Vogl, C. J., Taylor, M., & Guba, O. (2019). Efficient IMEX Runge-Kutta methods for nonhydrostatic dynamics. ArXiv:1906.07219 [Cs, Math]. Retrieved from http://arxiv.org/abs/1906.07219
  42. Sun, J., Zhang, K., Wan, H., Ma, P.-L., Tang, Q., & Zhang, S. (2019). Impact of Nudging Strategy on the Climate Representativeness and Hindcast Skill of Constrained EAMv1 Simulations. Journal of Advances in Modeling Earth Systems, 11(12), 3911–3933. https://doi.org/10.1029/2019MS001831
  43. Tang, J., & Riley, W. J. (2019). A Theory of Effective Microbial Substrate Affinity Parameters in Variably Saturated Soils and an Example Application to Aerobic Soil Heterotrophic Respiration. Journal of Geophysical Research: Biogeosciences, 124(4), 918–940. https://doi.org/10.1029/2018JG004779
  44. Tang, Q., Klein, S. A., Xie, S., Lin, W., Golaz, J.-C., Roesler, E. L., et al. (2019). Regionally refined test bed in E3SM atmosphere model version 1 (EAMv1) and applications for high-resolution modeling. Geoscientific Model Development, 12(7), 2679–2706. https://doi.org/10.5194/gmd-12-2679-2019
  45. Vogl, C. J., Steyer, A., Reynolds, D. R., Ullrich, P. A., & Woodward, C. S. (2019). Evaluation of Implicit-Explicit Additive Runge-Kutta Integrators for the HOMME-NH Dynamical Core. Journal of Advances in Modeling Earth Systems, 11(12), 4228–4244. https://doi.org/10.1029/2019MS001700
  46. Wang, W., Zender, C. S., As, D. van, & Miller, N. B. (2019). Spatial Distribution of Melt Season Cloud Radiative Effects Over Greenland: Evaluating Satellite Observations, Reanalyses, and Model Simulations Against In Situ Measurements. Journal of Geophysical Research: Atmospheres, 124(1), 57–71. https://doi.org/10.1029/2018JD028919
  47. Wu, M., Liu, X., Yang, K., Luo, T., Wang, Z., Wu, C., et al. (2019). Modeling Dust in East Asia by CESM and Sources of Biases. Journal of Geophysical Research: Atmospheres, 124(14), 8043–8064. https://doi.org/10.1029/2019JD030799
  48. Xie, S., Wang, Y.-C., Lin, W., Ma, H.-Y., Tang, Q., Tang, S., et al. (2019). Improved Diurnal Cycle of Precipitation in E3SM With a Revised Convective Triggering Function. Journal of Advances in Modeling Earth Systems, 11(7), 2290–2310. https://doi.org/10.1029/2019MS001702
  49. Xu, X., Jain, A. K., & Calvin, K. V. (2019). Quantifying the biophysical and socioeconomic drivers of changes in forest and agricultural land in South and Southeast Asia. Global Change Biology, 25(6), 2137–2151. https://doi.org/10.1111/gcb.14611
  50. Yang, X., Ricciuto, D. M., Thornton, P. E., Shi, X., Xu, M., Hoffman, F., & Norby, R. J. (2019). The Effects of Phosphorus Cycle Dynamics on Carbon Sources and Sinks in the Amazon Region: A Modeling Study Using ELM v1. Journal of Geophysical Research: Biogeosciences, 124(12), 3686–3698. https://doi.org/10.1029/2019JG005082
  51. Zhang, S., Wan, H., Rasch, P. J., Singh, B., Larson, V. E., & Woodward, C. S. (2019). An Objective and Efficient Method for Assessing the Impact of Reduced-Precision Calculations On Solution Correctness. Journal of Advances in Modeling Earth Systems, 11(10), 3131–3147. https://doi.org/10.1029/2019MS001817
  52. Zhang, Y., Xie, S., Lin, W., Klein, S. A., Zelinka, M., Ma, P.-L., et al. (2019). Evaluation of Clouds in Version 1 of the E3SM Atmosphere Model With Satellite Simulators. Journal of Advances in Modeling Earth Systems, 11(5), 1253–1268. https://doi.org/10.1029/2018MS001562
  53. Zheng, X., Golaz, J.-C., Xie, S., Tang, Q., Lin, W., Zhang, M., et al. (2019). The Summertime Precipitation Bias in E3SM Atmosphere Model Version 1 over the Central United States. Journal of Geophysical Research: Atmospheres, 124(16), 8935–8952. https://doi.org/10.1029/2019JD030662
  54. Zhu, Q., Riley, W. J., Tang, J., Collier, N., Hoffman, F. M., Yang, X., & Bisht, G. (2019). Representing Nitrogen, Phosphorus, and Carbon Interactions in the E3SM Land Model: Development and Global Benchmarking. Journal of Advances in Modeling Earth Systems, 11(7), 2238–2258. https://doi.org/10.1029/2018MS001571

2018

Published

  1. Bisht, G., Riley, W. J., Hammond, G. E., & Lorenzetti, D. M. (2018). Development and evaluation of a variably saturated flow model in the global E3SM Land Model (ELM) version 1.0. Geoscientific Model Development, 11(10), 4085–4102. https://doi.org/10.5194/gmd-11-4085-2018
  2. Bisht, G., Riley, W. J., Wainwright, H. M., Dafflon, B., Yuan, F., & Romanovsky, V. E. (2018). Impacts of microtopographic snow redistribution and lateral subsurface processes on hydrologic and thermal states in an Arctic polygonal ground ecosystem: a case study using ELM-3D v1.0. Geoscientific Model Development, 11(1), 61–76. https://doi.org/10.5194/gmd-11-61-2018
  3. Bjorkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Normand, S., Rüger, N., Beck, P. S. A., et al. (2018). Plant functional trait change across a warming tundra biome. Nature, 562(7725), 57–62. https://doi.org/10.1038/s41586-018-0563-7
  4. Brown, H., Liu, X., Feng, Y., Jiang, Y., Wu, M., Lu, Z., et al. (2018). Radiative effect and climate impacts of brown carbon with the Community Atmosphere Model (CAM5). Atmospheric Chemistry and Physics, 18(24), 17745–17768. https://doi.org/10.5194/acp-18-17745-2018
  5. Chen, Y., Wang, H., Singh, B., Ma, P.-L., Rasch, P. J., & Bond, T. C. (2018). Investigating the Linear Dependence of Direct and Indirect Radiative Forcing on Emission of Carbonaceous Aerosols in a Global Climate Model. Journal of Geophysical Research: Atmospheres, 123(3), 1657–1672. https://doi.org/10.1002/2017JD027244
  6. Collalti, A., Trotta, C., Keenan, T. F., Ibrom, A., Bond‐Lamberty, B., Grote, R., et al. (2018). Thinning Can Reduce Losses in Carbon Use Efficiency and Carbon Stocks in Managed Forests Under Warmer Climate. Journal of Advances in Modeling Earth Systems, 10(10), 2427–2452. https://doi.org/10.1029/2018MS001275
  7. Delman, A. S., McClean, J. L., Sprintall, J., Talley, L. D., & Bryan, F. O. (2018). Process‐Specific Contributions to Anomalous Java Mixed Layer Cooling During Positive IOD Events. Journal of Geophysical Research: Oceans, 123(6), 4153–4176. https://doi.org/10.1029/2017JC013749
  8. Fyke, J., Sergienko, O., Löfverström, M., Price, S., & Lenaerts, J. T. M. (2018). An Overview of Interactions and Feedbacks Between Ice Sheets and the Earth System. Reviews of Geophysics, 56(2), 361–408. https://doi.org/10.1029/2018RG000600
  9. Gorris, M. E., Cat, L. A., Zender, C. S., Treseder, K. K., & Randerson, J. T. (2018). Coccidioidomycosis Dynamics in Relation to Climate in the Southwestern United States: Cocci. and climate in the SW U.S. GeoHealth, 2(1), 6–24. https://doi.org/10.1002/2017GH000095
  10. Harrop, B. E., Ma, P.-L., Rasch, P. J., Neale, R. B., & Hannay, C. (2018). The Role of Convective Gustiness in Reducing Seasonal Precipitation Biases in the Tropical West Pacific. Journal of Advances in Modeling Earth Systems, 10(4), 961–970. https://doi.org/10.1002/2017MS001157
  11. Hoffman, M. J., Perego, M., Price, S. F., Lipscomb, W. H., Zhang, T., Jacobsen, D., et al. (2018). MPAS-Albany Land Ice (MALI): a variable-resolution ice sheet model for Earth system modeling using Voronoi grids. Geoscientific Model Development, 11(9), 3747–3780. https://doi.org/10.5194/gmd-11-3747-2018
  12. Jones, A. D., Calvin, K. V., Shi, X., Vittorio, A. V. D., Bond‐Lamberty, B., Thornton, P. E., & Collins, W. D. (2018). Quantifying Human-Mediated Carbon Cycle Feedbacks. Geophysical Research Letters, 45(20), 11,370-11,379. https://doi.org/10.1029/2018GL079350
  13. Kuipers Munneke, P., Luckman, A. J., Bevan, S. L., Smeets, C. J. P. P., Gilbert, E., van den Broeke, M. R., et al. (2018). Intense Winter Surface Melt on an Antarctic Ice Shelf. Geophysical Research Letters, 45(15), 7615–7623. https://doi.org/10.1029/2018GL077899
  14. Larios, A., Petersen, M. R., Titi, E. S., & Wingate, B. (2018). A computational investigation of the finite-time blow-up of the 3D incompressible Euler equations based on the Voigt regularization. Theoretical and Computational Fluid Dynamics, 32(1), 23–34. https://doi.org/10.1007/s00162-017-0434-0
  15. Lee, D., Palha, A., & Gerritsma, M. (2018). Discrete conservation properties for shallow water flows using mixed mimetic spectral elements. Journal of Computational Physics, 357, 282–304. https://doi.org/10.1016/j.jcp.2017.12.022
  16. Li, F., Lawrence, D. M., & Bond-Lamberty, B. (2018). Human impacts on 20th century fire dynamics and implications for global carbon and water trajectories. Global and Planetary Change, 162, 18–27. https://doi.org/10.1016/j.gloplacha.2018.01.002
  17. Ma, P.-L., Rasch, P. J., Chepfer, H., Winker, D. M., & Ghan, S. J. (2018). Observational constraint on cloud susceptibility weakened by aerosol retrieval limitations. Nature Communications, 9(1). https://doi.org/10.1038/s41467-018-05028-4
  18. MacDonald, A. B., Dadashazar, H., Chuang, P. Y., Crosbie, E., Wang, H., Wang, Z., et al. (2018). Characteristic Vertical Profiles of Cloud Water Composition in Marine Stratocumulus Clouds and Relationships With Precipitation. Journal of Geophysical Research: Atmospheres, 123(7), 3704–3723. https://doi.org/10.1002/2017JD027900
  19. Mahajan, S., Evans, K. J., Branstetter, M. L., & Tang, Q. (2018). Model Resolution Sensitivity of the Simulation of North Atlantic Oscillation Teleconnections to Precipitation Extremes. Journal of Geophysical Research: Atmospheres, 123(20), 11,392-11,409. https://doi.org/10.1029/2018JD028594
  20. Niu, H., Kang, S., Wang, H., Zhang, R., Lu, X., Qian, Y., et al. (2018). Seasonal variation and light absorption property of carbonaceous aerosol in a typical glacier region of the southeastern Tibetan Plateau. Atmospheric Chemistry and Physics, 18(9), 6441–6460. https://doi.org/10.5194/acp-18-6441-2018
  21. Qian, Y., Wan, H., Yang, B., Golaz, J.-C., Harrop, B., Hou, Z., et al. (2018). Parametric Sensitivity and Uncertainty Quantification in the Version 1 of E3SM Atmosphere Model Based on Short Perturbed Parameter Ensemble Simulations. Journal of Geophysical Research: Atmospheres, 123(23), 13,046-13,073. https://doi.org/10.1029/2018JD028927
  22. Ricciuto, D., Sargsyan, K., & Thornton, P. (2018). The Impact of Parametric Uncertainties on Biogeochemistry in the E3SM Land Model. Journal of Advances in Modeling Earth Systems, 10(2), 297–319. https://doi.org/10.1002/2017MS000962
  23. Riley, W. J., Zhu, Q., & Tang, J. Y. (2018). Weaker land–climate feedbacks from nutrient uptake during photosynthesis-inactive periods. Nature Climate Change, 8(11), 1002–1006. https://doi.org/10.1038/s41558-018-0325-4
  24. Roberts, A. F., Hunke, E. C., Allard, R., Bailey, D. A., Craig, A. P., Lemieux, J.-F., & Turner, M. D. (2018). Quality control for community-based sea-ice model development. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 376(2129), 20170344. https://doi.org/10.1098/rsta.2017.0344
  25. Saravia, L. A., Doyle, S. R., & Bond-Lamberty, B. (2018). Power laws and critical fragmentation in global forests. Scientific Reports, 8(1), 17766. https://doi.org/10.1038/s41598-018-36120-w
  26. van Sebille, E., Griffies, S. M., Abernathey, R., Adams, T. P., Berloff, P., Biastoch, A., et al. (2018). Lagrangian ocean analysis: Fundamentals and practices. Ocean Modelling, 121, 49–75. https://doi.org/10.1016/j.ocemod.2017.11.008
  27. Tan, Z., Leung, L. R., Li, H.-Y., & Tesfa, T. (2018). Modeling Sediment Yield in Land Surface and Earth System Models: Model Comparison, Development, and Evaluation. Journal of Advances in Modeling Earth Systems, 10(9), 2192–2213. https://doi.org/10.1029/2017MS001270
  28. Tang, J., & Riley, W. J. (2018). Predicted Land Carbon Dynamics Are Strongly Dependent on the Numerical Coupling of Nitrogen Mobilizing and Immobilizing Processes: A Demonstration with the E3SM Land Model. Earth Interactions, 22(11), 1–18. https://doi.org/10.1175/EI-D-17-0023.1 
  29. Terai, C. R., Caldwell, P. M., Klein, S. A., Tang, Q., & Branstetter, M. L. (2018). The atmospheric hydrologic cycle in the ACME v0.3 model. Climate Dynamics, 50(9–10), 3251–3279. https://doi.org/10.1007/s00382-017-3803-x
  30. Turner, A., Lipscomb, W., Hunke, E., Jacobsen, D., Jeffery, N., Ringler, T., & Wolfe, J. (2018). Mpas-Seaice: A New Variable Resolution Sea-Ice Model. https://doi.org/10.5281/ZENODO.1194373
  31. Van Roekel, L., Adcroft, A. J., Danabasoglu, G., Griffies, S. M., Kauffman, B., Large, W., et al. (2018). The KPP Boundary Layer Scheme for the Ocean: Revisiting Its Formulation and Benchmarking One-Dimensional Simulations Relative to LES. Journal of Advances in Modeling Earth Systems, 10(11), 2647–2685. https://doi.org/10.1029/2018MS001336
  32. Wang, H., Burleyson, C. D., Ma, P.-L., Fast, J. D., & Rasch, P. J. (2018). Using the Atmospheric Radiation Measurement (ARM) Datasets to Evaluate Climate Models in Simulating Diurnal and Seasonal Variations of Tropical Clouds. Journal of Climate, 31(8), 3301–3325. https://doi.org/10.1175/JCLI-D-17-0362.1
  33. Wang, W., Zender, C. S., van As, D., & Miller, N. B. (2018). Spatial distribution of melt‐season cloud radiative effects over Greenland: Evaluating satellite observations, reanalyses, and model simulations against in situ measurements. Journal of Geophysical Research: Atmospheres. https://doi.org/10.1029/2018JD028919
  34. Wang, W., Zender, C. S., & van As, D. (2018). Temporal Characteristics of Cloud Radiative Effects on the Greenland Ice Sheet: Discoveries From Multiyear Automatic Weather Station Measurements. Journal of Geophysical Research: Atmospheres, 123(20), 11,348-11,361. https://doi.org/10.1029/2018JD028540
  35. Xie, S., Lin, W., Rasch, P. J., Ma, P.-L., Neale, R., Larson, V. E., et al. (2018). Understanding Cloud and Convective Characteristics in Version 1 of the E3SM Atmosphere Model. Journal of Advances in Modeling Earth Systems, 10(10), 2618–2644. https://doi.org/10.1029/2018MS001350
  36. Zhang, K., Rasch, P. J., Taylor, M. A., Wan, H., Leung, R., Ma, P.-L., et al. (2018). Impact of numerical choices on water conservation in the E3SM Atmosphere Model version 1 (EAMv1). Geoscientific Model Development, 11(5), 1971–1988. https://doi.org/10.5194/gmd-11-1971-2018


2017

Published

  1. Asay-Davis, X. S., Jourdain, N. C., & Nakayama, Y. (2017). Developments in Simulating and Parameterizing Interactions Between the Southern Ocean and the Antarctic Ice Sheet. Current Climate Change Reports, 3(4), 316–329. https://doi.org/10.1007/s40641-017-0071-0
  2. Berres, A. S., Turton, T. L., Petersen, M., Rogers, D. H., & Ahrens, J. P. (2017). Video Compression for Ocean Simulation Image Databases. Workshop on Visualisation in Environmental Sciences (EnvirVis), 5 pages. https://doi.org/10.2312/ENVIRVIS.20171104
  3. Butler, E. E., Datta, A., Flores-Moreno, H., Chen, M., Wythers, K. R., Fazayeli, F., et al. (2017). Mapping local and global variability in plant trait distributions. Proceedings of the National Academy of Sciences, 114(51), E10937–E10946. https://doi.org/10.1073/pnas.1708984114
  4. Chen, R., Gille, S. T., & McClean, J. L. (2017). Isopycnal eddy mixing across the Kuroshio Extension: Stable versus unstable states in an eddying model: MIXING ACROSS KUROSHIO EXTENSION. Journal of Geophysical Research: Oceans, 122(5), 4329–4345. https://doi.org/10.1002/2016JC012164
  5. Duarte, H. F., Raczka, B. M., Ricciuto, D. M., Lin, J. C., Koven, C. D., Thornton, P. E., et al. (2017). Evaluating the Community Land Model (CLM4.5) at a coniferous forest site in northwestern United States using flux and carbon-isotope measurements. Biogeosciences, 14(18), 4315–4340. https://doi.org/10.5194/bg-14-4315-2017
  6. Fang, Y., Leung, L. R., Duan, Z., Wigmosta, M. S., Maxwell, R. M., Chambers, J. Q., & Tomasella, J. (2017). Influence of landscape heterogeneity on water available to tropical forests in an Amazonian catchment and implications for modeling drought response. Journal of Geophysical Research: Atmospheres, 122(16), 8410–8426. https://doi.org/10.1002/2017JD027066
  7. Hewitt, H. T., Bell, M. J., Chassignet, E. P., Czaja, A., Ferreira, D., Griffies, S. M., et al. (2017). Will high-resolution global ocean models benefit coupled predictions on short-range to climate timescales? Ocean Modelling, 120, 120–136. https://doi.org/10.1016/j.ocemod.2017.11.002
  8. Leng, G., Leung, L. R., & Huang, M. (2017). Significant impacts of irrigation water sources and methods on modeling irrigation effects in the ACME Land Model. Journal of Advances in Modeling Earth Systems, 9(3), 1665–1683. https://doi.org/10.1002/2016MS000885
  9. Liu, S., Bond-Lamberty, B., Boysen, L. R., Ford, J. D., Fox, A., Gallo, K., et al. (2017). Grand Challenges in Understanding the Interplay of Climate and Land Changes. Earth Interactions, 21(2), 1–43. https://doi.org/10.1175/EI-D-16-0012.1
  10. Luo, X., Li, H.-Y., Leung, L. R., Tesfa, T. K., Getirana, A., Papa, F., & Hess, L. L. (2017). Modeling surface water dynamics in the Amazon Basin using MOSART-Inundation v1.0: impacts of geomorphological parameters and river flow representation. Geoscientific Model Development, 10(3), 1233–1259. https://doi.org/10.5194/gmd-10-1233-2017
  11. Mahajan, S., Gaddis, A. L., Evans, K. J., & Norman, M. R. (2017). Exploring an Ensemble-Based Approach to Atmospheric Climate Modeling and Testing at Scale. Procedia Computer Science, 108, 735–744. https://doi.org/10.1016/j.procs.2017.05.259
  12. Metcalfe, D. B., Ricciuto, D., Palmroth, S., Campbell, C., Hurry, V., Mao, J., et al. (2017). Informing climate models with rapid chamber measurements of forest carbon uptake. Global Change Biology, 23(5), 2130–2139. https://doi.org/10.1111/gcb.13451
  13. Parajuli, S. P., & Zender, C. S. (2017). Connecting geomorphology to dust emission through high-resolution mapping of global land cover and sediment supply. Aeolian Research, 27, 47–65. https://doi.org/10.1016/j.aeolia.2017.06.002
  14. Ringler, T., Saenz, J. A., Wolfram, P. J., & Van Roekel, L. (2017). A Thickness-Weighted Average Perspective of Force Balance in an Idealized Circumpolar Current. Journal of Physical Oceanography, 47(2), 285–302. https://doi.org/10.1175/JPO-D-16-0096.1
  15. Scripps Institution of Oceanography, Centurioni, L., Hormann, V., Talley, L., Arzeno, I., Beal, L., et al. (2017). Northern Arabian Sea Circulation-Autonomous Research (NASCar): A Research Initiative Based on Autonomous Sensors. Oceanography, 30(2), 74–87. https://doi.org/10.5670/oceanog.2017.224
  16. Silver, J. D., & Zender, C. S. (2017). The compression–error trade-off for large gridded data sets. Geoscientific Model Development, 10(1), 413–423. https://doi.org/10.5194/gmd-10-413-2017
  17. Stephan, E., Raju, B., Elsethagen, T., Pouchard, L., & Gamboa, C. (2017). A scientific data provenance harvester for distributed applications. In 2017 New York Scientific Data Summit (NYSDS) (pp. 1–9). New York, NY, USA: IEEE. https://doi.org/10.1109/NYSDS.2017.8085041
  18. Sun, Y., Peng, S., Goll, D. S., Ciais, P., Guenet, B., Guimberteau, M., et al. (2017). Diagnosing phosphorus limitations in natural terrestrial ecosystems in carbon cycle models. Earth’s Future, 5(7), 730–749. https://doi.org/10.1002/2016EF000472
  19. Tan, Z., Leung, L. R., Li, H., Tesfa, T., Vanmaercke, M., Poesen, J., et al. (2017). A Global Data Analysis for Representing Sediment and Particulate Organic Carbon Yield in Earth System Models: A GLOBAL DATA ANALYSIS OF SEDIMENT YIELD. Water Resources Research, 53(12), 10674–10700. https://doi.org/10.1002/2017WR020806
  20. Tang, J.-Y., & Riley, W. J. (2017). SUPECA kinetics for scaling redox reactions in networks of mixed substrates and consumers and an example application to aerobic soil respiration. Geoscientific Model Development, 10(9), 3277–3295. https://doi.org/10.5194/gmd-10-3277-2017
  21. Tesfa, T. K., & Leung, L.-Y. R. (2017). Exploring new topography-based subgrid spatial structures for improving land surface modeling. Geoscientific Model Development, 10(2), 873–888. https://doi.org/10.5194/gmd-10-873-2017
  22. Thornton, P. E., Calvin, K., Jones, A. D., Di Vittorio, A. V., Bond-Lamberty, B., Chini, L., et al. (2017). Biospheric feedback effects in a synchronously coupled model of human and Earth systems. Nature Climate Change, 7(7), 496–500. https://doi.org/10.1038/nclimate3310
  23. Urrego-Blanco, J. R., Hunke, E. C., Urban, N. M., Jeffery, N., Turner, A. K., Langenbrunner, J. R., & Booker, J. M. (2017). Validation of sea ice models using an uncertainty-based distance metric for multiple model variables: NEW METRIC FOR SEA ICE MODEL VALIDATION. Journal of Geophysical Research: Oceans, 122(4), 2923–2944. https://doi.org/10.1002/2016JC012602
  24. Voisin, N., Hejazi, M. I., Leung, L. R., Liu, L., Huang, M., Li, H.-Y., & Tesfa, T. (2017). Effects of spatially distributed sectoral water management on the redistribution of water resources in an integrated water model. Water Resources Research, 53(5), 4253–4270. https://doi.org/10.1002/2016WR019767
  25. Wan, H., Zhang, K., Rasch, P. J., Singh, B., Chen, X., & Edwards, J. (2017). A new and inexpensive non-bit-for-bit solution reproducibility test based on time step convergence (TSC1.0). Geoscientific Model Development, 10(2), 537–552. https://doi.org/10.5194/gmd-10-537-2017
  26. Wan, W., Zhao, J., Li, H.-Y., Mishra, A., Leung, L. R., Hejazi, M., et al. (2017). Hydrological Drought in the Anthropocene: Impacts of Local Water Extraction and Reservoir Regulation in the U.S. Journal of Geophysical Research: Atmospheres, 122(21), 11,313-11,328. https://doi.org/10.1002/2017JD026899
  27. Wang, D., Luo, X., Yuan, F., & Podhorszki, N. (2017). A Data Analysis Framework for Earth System Simulation within an In-Situ Infrastructure. Journal of Computer and Communications, 05(14), 76–85. https://doi.org/10.4236/jcc.2017.514007
  28. Wang, Dali, Pei, Y., Hernandez, O., Wu, W., Yao, Z., Kim, Y., et al. (2017). Compiler technologies for understanding legacy scientific code: A case study on an ACME land module. Procedia Computer Science, 108, 2418–2422. https://doi.org/10.1016/j.procs.2017.05.264
  29. Williams, D. N. (2017). 6th Annual Earth System Grid Federation Face to Face Conference Report (No. LLNL–TR-726011, 1369382). https://doi.org/10.2172/1369382
  30. Wolfram, P. J., & Ringler, T. D. (2017a). Computing eddy-driven effective diffusivity using Lagrangian particles. Ocean Modelling, 118, 94–106. https://doi.org/10.1016/j.ocemod.2017.08.008
  31. Wolfram, P. J., & Ringler, T. D. (2017b). Quantifying Residual, Eddy, and Mean Flow Effects on Mixing in an Idealized Circumpolar Current. Journal of Physical Oceanography, 47(8), 1897–1920. https://doi.org/10.1175/JPO-D-16-0101.1
  32. Xu, Y., Wang, D., Janjusic, T., Wu, W., Pei, Y., & Yao, Z. (2017). A Web-based Visual Analytic Framework for Understanding Large-scale Environmental Models: A Use Case for The Community Land Model. Procedia Computer Science, 108, 1731–1740. https://doi.org/10.1016/j.procs.2017.05.181
  33. Zhu, Q., Riley, W. J., & Tang, J. (2017). A new theory of plant-microbe nutrient competition resolves inconsistencies between observations and model predictions. Ecological Applications, 27(3), 875–886. https://doi.org/10.1002/eap.1490

 

2016

Published

  1. Asay-Davis, X. S., Cornford, S. L., Durand, G., Galton-Fenzi, B. K., Gladstone, R. M., Gudmundsson, G. H., et al. (2016). Experimental design for three interrelated marine ice sheet and ocean model intercomparison projects: MISMIP v. 3 (MISMIP +), ISOMIP v. 2 (ISOMIP +) and MISOMIP v. 1 (MISOMIP1). Geoscientific Model Development, 9(7), 2471–2497. https://doi.org/10.5194/gmd-9-2471-2016
  2. Brunke, M. A., Broxton, P., Pelletier, J., Gochis, D., Hazenberg, P., Lawrence, D. M., et al. (2016). Implementing and Evaluating Variable Soil Thickness in the Community Land Model, Version 4.5 (CLM4.5). Journal of Climate, 29(9), 3441–3461. https://doi.org/10.1175/JCLI-D-15-0307.1
  3. Burrows, S. M., Gobrogge, E., Fu, L., Link, K., Elliott, S. M., Wang, H., & Walker, R. (2016). OCEANFILMS-2: Representing coadsorption of saccharides in marine films and potential impacts on modeled marine aerosol chemistry: SACCHARIDE COADSORPTION IN MARINE FILMS. Geophysical Research Letters, 43(15), 8306–8313. https://doi.org/10.1002/2016GL069070
  4. Center for Coastal Physical Oceanography, Old Dominion University, Dinniman, M., Asay-Davis, X., Galton-Fenzi, B., Holland, P., Jenkins, A., & Timmermann, R. (2016). Modeling Ice Shelf/Ocean Interaction in Antarctica: A Review. Oceanography, 29(4), 144–153. https://doi.org/10.5670/oceanog.2016.106
  5. Ghimire, B., Riley, W. J., Koven, C. D., Mu, M., & Randerson, J. T. (2016). Representing leaf and root physiological traits in CLM improves global carbon and nitrogen cycling predictions: LEAF AND ROOT TRAITS IN CLM. Journal of Advances in Modeling Earth Systems, 8(2), 598–613. https://doi.org/10.1002/2015MS000538
  6. Gleckler, P., Doutriaux, C., Durack, P., Taylor, K., Zhang, Y., Williams, D., et al. (2016). A More Powerful Reality Test for Climate Models. Eos, 97. https://doi.org/10.1029/2016EO051663
  7. He, H., Wang, D., Xu, Y., & Tan, J. (2016). Data synthesis in the Community Land Model for ecosystem simulation. Journal of Computational Science, 13, 83–95. https://doi.org/10.1016/j.jocs.2016.01.005
  8. Mao, J., Ricciuto, D. M., Thornton, P. E., Warren, J. M., King, A. W., Shi, X., et al. (2016). Evaluating the Community Land Model in a pine stand with shading manipulations and 13 CO 2 Biogeosciences, 13(3), 641–657. https://doi.org/10.5194/bg-13-641-2016
  9. McEnerney, J., Ames, S., Christensen, C., Doutriaux, C., Hoang, T., Painter, J., et al. (2016). Parallelization of Diagnostics for Climate Model Development. Journal of Software Engineering and Applications, 09(05), 199–207. https://doi.org/10.4236/jsea.2016.95016
  10. Medlyn, B. E., De Kauwe, M. G., Zaehle, S., Walker, A. P., Duursma, R. A., Luus, K., et al. (2016). Using models to guide field experiments: a priori predictions for the CO 2 response of a nutrient- and water-limited native Eucalypt woodland. Global Change Biology, 22(8), 2834–2851. https://doi.org/10.1111/gcb.13268
  11. Raczka, B., Duarte, H. F., Koven, C. D., Ricciuto, D., Thornton, P. E., Lin, J. C., & Bowling, D. R. (2016). An observational constraint on stomatal function in forests: evaluating coupled carbon and water vapor exchange with carbon isotopes in the Community Land Model (CLM4.5). Biogeosciences, 13(18), 5183–5204. https://doi.org/10.5194/bg-13-5183-2016
  12. Ren, H., Hou, Z., Huang, M., Bao, J., Sun, Y., Tesfa, T., & Ruby Leung, L. (2016). Classification of hydrological parameter sensitivity and evaluation of parameter transferability across 431 US MOPEX basins. Journal of Hydrology, 536, 92–108. https://doi.org/10.1016/j.jhydrol.2016.02.042
  13. Sun, Y., Piao, S., Huang, M., Ciais, P., Zeng, Z., Cheng, L., et al. (2016). Global patterns and climate drivers of water-use efficiency in terrestrial ecosystems deduced from satellite-based datasets and carbon cycle models: Global patterns of ecosystem WUE. Global Ecology and Biogeography, 25(3), 311–323. https://doi.org/10.1111/geb.12411
  14. Tang, G., Zheng, J., Xu, X., Yang, Z., Graham, D. E., Gu, B., et al. (2016). Biogeochemical modeling of CO 2 and CH 4 production in anoxic Arctic soil microcosms. Biogeosciences, 13(17), 5021–5041. https://doi.org/10.5194/bg-13-5021-2016
  15. Wang, W., Zender, C. S., van As, D., Smeets, P. C. J. P., & van den Broeke, M. R. (2016). A Retrospective, Iterative, Geometry-Based (RIGB) tilt-correction method for radiation observed by automatic weather stations on snow-covered surfaces: application to Greenland. The Cryosphere, 10(2), 727–741. https://doi.org/10.5194/tc-10-727-2016
  16. Ware, C., Rogers, D., Petersen, M., Ahrens, J., & Aygar, E. (2016). Optimizing for Visual Cognition in High Performance Scientific Computing. Electronic Imaging, 2016(16), 1–9. https://doi.org/10.2352/ISSN.2470-1173.2016.16.HVEI-130
  17. Williams, D. (2016). Better Tools to Build Better Climate Models. Eos, 97. https://doi.org/10.1029/2016EO045055
  18. Williams, D. N. (2016). 5th Annual Earth System Grid Federation (No. LLNL-TR–689917, 1253685). https://doi.org/10.2172/1253685
  19. Williams, D. N., Balaji, V., Cinquini, L., Denvil, S., Duffy, D., Evans, B., et al. (2016). A Global Repository for Planet-Sized Experiments and Observations. Bulletin of the American Meteorological Society, 97(5), 803–816. https://doi.org/10.1175/BAMS-D-15-00132.1
  20. Williams, D. N., Doutriaux, C., Aashish Chaudhary, Fries, S., Lipsa, D., Sankhesh Jhaveri, et al. (2016). Uvcdat V2.4.0. Zenodo. https://doi.org/10.5281/ZENODO.45136
  21. Woodring, J., Petersen, M., Schmeiber, A., Patchett, J., Ahrens, J., & Hagen, H. (2016). In Situ Eddy Analysis in a High-Resolution Ocean Climate Model. IEEE Transactions on Visualization and Computer Graphics, 22(1), 857–866. https://doi.org/10.1109/TVCG.2015.2467411
  22. Xu, L., Cameron-Smith, P., Russell, L. M., Ghan, S. J., Liu, Y., Elliott, S., et al. (2016). DMS role in ENSO cycle in the tropics: DMS Role in ENSO Cycle in Tropics. Journal of Geophysical Research: Atmospheres, 121(22), 13,537-13,558. https://doi.org/10.1002/2016JD025333
  23. Yao, Z., Jia, Y., Wang, D., Steed, C., & Atchley, S. (2016). In Situ Data Infrastructure for Scientific Unit Testing Platform 1. Procedia Computer Science, 80, 587–598. https://doi.org/10.1016/j.procs.2016.05.344
  24. Zender, C. S. (2016). Bit Grooming: statistically accurate precision-preserving quantization with compression, evaluated in the netCDF Operators (NCO, v4.4.8+). Geoscientific Model Development, 9(9), 3199–3211. https://doi.org/10.5194/gmd-9-3199-2016
  25. Zhang, L., Mao, J., Shi, X., Ricciuto, D., He, H., Thornton, P., et al. (2016). Evaluation of the Community Land Model simulated carbon and water fluxes against observations over ChinaFLUX sites. Agricultural and Forest Meteorology, 226227, 174–185. https://doi.org/10.1016/j.agrformet.2016.05.018
  26. Zhu, Q., Riley, W. J., Tang, J., & Koven, C. D. (2016). Multiple soil nutrient competition between plants, microbes, and mineral surfaces: model development, parameterization, and example applications in several tropical forests. Biogeosciences, 13(1), 341–363. https://doi.org/10.5194/bg-13-341-2016

 

2015

Published

  1. Clark, M. P., Fan, Y., Lawrence, D. M., Adam, J. C., Bolster, D., Gochis, D. J., et al. (2015). Improving the representation of hydrologic processes in Earth System Models: REPRESENTING HYDROLOGIC PROCESSES IN EARTH SYSTEM MODELS. Water Resources Research, 51(8), 5929–5956. https://doi.org/10.1002/2015WR017096
  2. Collins, W. D., Craig, A. P., Truesdale, J. E., Di Vittorio, A. V., Jones, A. D., Bond-Lamberty, B., et al. (2015). The integrated Earth system model version 1: formulation and functionality. Geoscientific Model Development, 8(7), 2203–2219. https://doi.org/10.5194/gmd-8-2203-2015
  3. Jones, A. D., Calvin, K. V., Collins, W. D., & Edmonds, J. (2015). Accounting for radiative forcing from albedo change in future global land-use scenarios. Climatic Change, 131(4), 691–703. https://doi.org/10.1007/s10584-015-1411-5
  4. Leng, G., Huang, M., Tang, Q., & Leung, L. R. (2015). A modeling study of irrigation effects on global surface water and groundwater resources under a changing climate: IRRIGATION EFFECTS ON WATER RESOURCES. Journal of Advances in Modeling Earth Systems, 7(3), 1285–1304. https://doi.org/10.1002/2015MS000437
  5. Li, H.-Y., Leung, L. R., Getirana, A., Huang, M., Wu, H., Xu, Y., et al. (2015). Evaluating Global Streamflow Simulations by a Physically Based Routing Model Coupled with the Community Land Model. Journal of Hydrometeorology, 16(2), 948–971. https://doi.org/10.1175/JHM-D-14-0079.1
  6. Li, H.-Y., Leung, L. R., Tesfa, T., Voisin, N., Hejazi, M., Liu, L., et al. (2015). Modeling stream temperature in the Anthropocene: An earth system modeling approach. Journal of Advances in Modeling Earth Systems, 7(4), 1661–1679. https://doi.org/10.1002/2015MS000471
  7. Petersen, M. R., Jacobsen, D. W., Ringler, T. D., Hecht, M. W., & Maltrud, M. E. (2015). Evaluation of the arbitrary Lagrangian–Eulerian vertical coordinate method in the MPAS-Ocean model. Ocean Modelling, 86, 93–113. https://doi.org/10.1016/j.ocemod.2014.12.004
  8. Reckinger, S. M., Petersen, M. R., & Reckinger, S. J. (2015). A study of overflow simulations using MPAS-Ocean: Vertical grids, resolution, and viscosity. Ocean Modelling, 96, 291–313. https://doi.org/10.1016/j.ocemod.2015.09.006
  9. Reed, S. C., Yang, X., & Thornton, P. E. (2015). Incorporating phosphorus cycling into global modeling efforts: a worthwhile, tractable endeavor. New Phytologist, 208(2), 324–329. https://doi.org/10.1111/nph.13521
  10. Safta, C., Ricciuto, D. M., Sargsyan, K., Debusschere, B., Najm, H. N., Williams, M., & Thornton, P. E. (2015). Global sensitivity analysis, probabilistic calibration, and predictive assessment for the data assimilation linked ecosystem carbon model. Geoscientific Model Development, 8(7), 1899–1918. https://doi.org/10.5194/gmd-8-1899-2015
  11. Samsel, F., Petersen, M., Geld, T., Abram, G., Wendelberger, J., & Ahrens, J. (2015). Colormaps that Improve Perception of High-Resolution Ocean Data. In Proceedings of the 33rd Annual ACM Conference Extended Abstracts on Human Factors in Computing Systems – CHI EA ’15 (pp. 703–710). Seoul, Republic of Korea: ACM Press. https://doi.org/10.1145/2702613.2702975
  12. Tang, J. Y. (2015). On the relationships between the Michaelis–Menten kinetics, reverse Michaelis–Menten kinetics, equilibrium chemistry approximation kinetics, and quadratic kinetics. Geoscientific Model Development, 8(12), 3823–3835. https://doi.org/10.5194/gmd-8-3823-2015
  13. Wang, S., Elliott, S., Maltrud, M., & Cameron‐Smith, P. (2015). Influence of explicit Phaeocystis parameterizations on the global distribution of marine dimethyl sulfide. Journal of Geophysical Research: Biogeosciences, 120(11), 2158–2177. https://doi.org/10.1002/2015JG003017
  14. Williams, D. N. (2015). 2014 Earth System Grid Federation and Ultrascale Visualization Climate Data Analysis Tools Conference Report (No. LLNL-TR–666753, 1182238). https://doi.org/10.2172/1182238
  15. Wolfram, P. J., Ringler, T. D., Maltrud, M. E., Jacobsen, D. W., & Petersen, M. R. (2015). Diagnosing Isopycnal Diffusivity in an Eddying, Idealized Midlatitude Ocean Basin via Lagrangian, in Situ, Global, High-Performance Particle Tracking (LIGHT). Journal of Physical Oceanography, 45(8), 2114–2133. https://doi.org/10.1175/JPO-D-14-0260.1
  16. Xu, X., Hui, D., King, A. W., Song, X., Thornton, P. E., & Zhang, L. (2015). Convergence of microbial assimilations of soil carbon, nitrogen, phosphorus and sulfur in terrestrial ecosystems. Scientific Reports, 5(1). https://doi.org/10.1038/srep17445
  17. Zhu, Q., & Riley, W. J. (2015). Improved modelling of soil nitrogen losses. Nature Climate Change, 5(8), 705–706. https://doi.org/10.1038/nclimate2696

 

2014

Published

  1. Ali, M., Ye, S., Li, H., Huang, M., Leung, L. R., Fiori, A., & Sivapalan, M. (2014). Regionalization of subsurface stormflow parameters of hydrologic models: Up-scaling from physically based numerical simulations at hillslope scale. Journal of Hydrology, 519, 683–698. https://doi.org/10.1016/j.jhydrol.2014.07.018
  2. Cai, X., Yang, Z.-L., Xia, Y., Huang, M., Wei, H., Leung, L. R., & Ek, M. B. (2014). Assessment of simulated water balance from Noah, Noah-MP, CLM, and VIC over CONUS using the NLDAS test bed. Journal of Geophysical Research: Atmospheres, 119(24), 13,751-13,770. https://doi.org/10.1002/2014JD022113
  3. Steed, C. A., Evans, K. J., Harney, J. F., Jewell, B. C., Shipman, G., Smith, B. E., et al. (2014). Web-based visual analytics for extreme scale climate science. In 2014 IEEE International Conference on Big Data (Big Data) (pp. 383–392). https://doi.org/10.1109/BigData.2014.7004255
  4. Ye, S., Li, H.-Y., Huang, M., Ali, M., Leng, G., Leung, L. R., et al. (2014). Regionalization of subsurface stormflow parameters of hydrologic models: Derivation from regional analysis of streamflow recession curves. Journal of Hydrology, 519, 670–682. https://doi.org/10.1016/j.jhydrol.2014.07.017

As of July 2020, we are reorganizing and updating the publications page.  The content below contains citations from the old publications page.  Eventually, all the publications below that have been published will be added to the list above, if they are not there already.  Thank you for your patience while we improve this publications page.

E3SM Phase 2 Publications

Water Cycle Group Publications

Published or In Press

  1. Bisht, Gautam, Riley, William J. (2019).  Development and Verification of a Numerical Library for Solving Global Terrestrial Multiphysics Problems.  Journal of Advances in Modeling Earth Systemshttps://doi.org/10.1029/2018ms001560.
  2. Caldwell, P. M., Mametjanov, A., Tang, Q., Van Roekel, L. P., Golaz, J.‐C., Lin, W. et al. ( 2019).  The DOE E3SM coupled model version 1: Description and results at high resolutionJournal of Advances in Modeling Earth Systems, 11. https://doi.org/10.1029/2019MS001870.
  3. Golaz, J.-C., P. M. Caldwell, L. P. Van Roekel, M. R. Petersen, Q. Tang, J. D. Wolfe and co-authors (2019).  The DOE E3SM coupled model version 1: Overview and evaluation at standard resolution. Journal of Advances in Modeling Earth Systems.  https://doi.org/10.1029/2018MS001603.
  4. Harrop et al. (2019).  Understanding Monsoonal Water Cycle Changes in a Warmer Climate in E3SMv1 Using a Normalized Gross Moist Stability Framework.  JGR Atmosphereshttps://doi.org/10.1029/2019JD031443.
  5. Jiang, T., Evans, K., Branstetter, M.,Caldwell, P., Neale, R., Rasch, P. J., et al. (2019).  Northern Hemisphere blocking in∼25-km-resolution E3SM v0.3 atmosphere-land simulations.  Journal of Geophysical Research: Atmospheres , 124, 2465–2482.  https://doi.org/10.1029/2018JD028892.
  6. Reeves Eyre, J.E.J, L.P Van Roekel, X. Zeng, M.A. Brunke, and J.-C. Golaz, (2019). Ocean barrier layers in the Energy Exascale Earth System Model. GRL.  https://doi.org/10.1029/2019GL083591.
  7. Tang, Q., Klein, S. A., Xie, S., Lin, W., Golaz, J.-C., Roesler, E. L., Taylor, M. A., Rasch, P. J., Bader, D. C., Berg, L. K., Caldwell, P., Giangrande, S. E., Neale, R. B., Qian, Y., Riihimaki, L. D., Zender, C. S., Zhang, Y., and Zheng, X. (2019).  Regionally refined test bed in E3SM atmosphere model version 1 (EAMv1) and applications for high-resolution modeling.  Geosci. Model Dev., 12, 2679-2706.  https://doi.org/10.5194/gmd-12-2679-2019.
  8. Zheng et al. (2019). The Summertime Precipitation Bias in E3SM Atmosphere Model Version 1 (EAMv1) over the Central United States. JGR Atmoshereshttps://doi.org/10.1029/2019JD030662.
  9. Qian, Y., Wan, H., Yang, B., Golaz, J.-C., Harrop, B., Hou, Z., et al. (2018).  Parametric sensitivity and uncertainty quantification in the version 1 of E3SM atmosphere model based on short perturbed parameter ensemble simulations.  Journal of Geophysical Research: Atmospheres, 123, 13046 – 13073.  https://doi.org/10.1029/2018JD028927.
  10. Xie, S., Lin, W., Rasch, P. J., Ma, P.-L., Neale, R., Larson, V. E., et al. (2018).  Understanding cloud and convective characteristics in version 1 of the E3SM atmosphere model.  Journal of Advances in Modeling Earth Systems, 10, 2618 – 2644.  https://doi.org/10.1029/2018MS001350.

 

Submitted

  1. Neale et al. (2018). Sub-Seasonal Tropical Variability in the Energy Exascale Earth System Model (E3SM) version 1, to be submitted to JAMES.

 

 

 

Biogeochemical Cycles Group Publications

Published or In Press

  1. Di Vittorio, A. V., Shi, X., Bond-Lamberty, B., Calvin, K., & Jones, A. (2020).  Initial land use/cover distribution substantially affects global carbon and local temperature projections in the integrated earth system model. Global Biogeochemical Cycles, 34, e2019GB006383.  https://doi.org/10.1029/2019GB006383.
  2. Di Vittorio, A, C Vernon, and S Shu. (2020).  Moirai Version 3: A Data Processing System to Generate Recent Historical Land Inputs for Global Modeling Applications at Various Scales.  Journal of Open Research Software, 8. https://doi.org/10.5334/jors.266.
  3. Holm, J. A., Knox, R. G., Zhu, Q., Fisher, R. A., Koven, C. D., Nogueira Lima, A. J., et al. ( 2020).  The central Amazon biomass sink under current and future atmospheric CO2: Predictions from big‐leaf and demographic vegetation modelsJournal of Geophysical Research: Biogeosciences125, e2019JG005500. https://doi.org/10.1029/2019JG005500.
  4. Metzler, H.Zhu, Q.Riley, W. J.Hoyt, A. M.Müller, M., & Sierra, C. A. ( 2020).  Mathematical reconstruction of land carbon models from their numerical output: Computing soil radiocarbon from C dynamicsJournal of Advances in Modeling Earth Systems12, e2019MS001776.  https://doi.org/10.1029/2019MS001776.
  5. Saunois, M., et.al. (2020). The Global Methane Budget 2000-2017.  Earth System Science Data. https://www.earth-syst-sci-data-discuss.net/essd-2019-128/.
  6. Tesfa, T. K., Leung, L. R., & Ghan, S. J. (2020).  Exploring topography‐based methods for downscaling subgrid precipitation for use in Earth System Models.  Journal of Geophysical Research: Atmospheres, 125, e2019JD031456. https://doi.org/10.1029/2019JD031456.
  7. Zhu, Q.Riley, W. J.Iversen, C. M., & Kattge, J. ( 2020).  Assessing impacts of plant stoichiometric traits on terrestrial ecosystem carbon accumulation using the E3SM land modelJournal of Advances in Modeling Earth Systems12, e2019MS001841. https://doi.org/10.1029/2019MS001841.
  8. Burrows, S.M., M.E. Maltrud, X. Yang, Q. Zhu, N. Jeffery, X. Shi, and D.M. Ricciuto, et al. (2019).  The DOE E3SM coupled model v1.1 biogeochemistry configuration: overview and evaluation of coupled carbon-climate experiments.  Journal of Advances in Modeling Earth Systems. https://agu.confex.com/agu/fm19/meetingapp.cgi/Paper/488136.
  9. Cai, X., Riley, W. J., Zhu, Q., Tang, J., Zeng, Z., Bisht, G., & Randerson, J. T. (2019).  Improving the representation of deforestation effects on evapotranspiration in the E3SM Earth system model. JAMES, 11, 2412.  https://doi.org/10.1029/2018MS001551.
  10. Calvin, K. V., Bond-Lamberty B, Jones A D, Shi X, Di Vittorio A, Thornton P E. (2019).  Characteristics of human-climate feedbacks differ at different radiative forcing levels.  Global Planetary Change.  https://doi.org/10.1016/j.gloplacha.2019.06.003.
  11. Chen, J, Q Zhu, W Riley, Y He, J Randerson, and S Trumbore (2019).  Comparison with Global Soil Radiocarbon Observations Indicates Needed Carbon Cycle Improvements in the E3SM Land Model.  Journal of Geophysical Research: Biogeoscienceshttp://doi.org/10.1029/2018jg004795.
  12. Di Vittorio, A., X. Shi, B. Bond-Lamberty, K.V. Calvin, and A.D. Jones (2019).  Land use/cover distribution is a primary determinant of global carbon and local temperature projections.  Geophysical Research Letters.
  13. Drewniak, B. A. (2019).  Simulating dynamic roots in the Energy Exascale Earth System Land Model.  Journal of Advances in Modeling Earth Systems.  https://doi.org/1029/2018MS001334.
  14. Fleischer, K., Rammig, A., De Kauwe, M.G. et al. (2019).  Amazon forest response to CO2 fertilization dependent on plant phosphorus acquisition. Nat. Geosci. 12, 736–741. https://doi.org/10.1038/s41561-019-0404-9.
  15. Mao, Y., Zhou, T., Leung, L. R., Tesfa, T. K., Li, H.‐Y., Wang, K., et al. ( 2019). Flood inundation generation mechanisms and their changes in 1953–2004 in global major river basins. Journal of Geophysical Research: Atmospheres, 124, 11672– 11692. https://doi.org/10.1029/2019JD031381.
  16. Bjorkman,  A.D., I.H. Myers-Smith, S.C. Elmendorf, H. Thomas, J. Kattge, S. Diaz, and M. Vellend, et al. (2018).  Change in plant functional traits across a warming tundra biome.  Nature562, no. 7725:57-62.  https://doi.org/1038/s41586-018-0563-7.
  17. Collalti, A., C. Trotta, T. Keenan, A. Ibrom, B. Medlyn, C. Reyer, and R. Grote, et al. (2018).  Thinning Can Reduce Losses in Carbon Use Efficiency and Carbon Stocks in Managed Forests Under Warmer Climate.  Journal of Advances in Modeling Earth Systems 10, no. 10:2427-2452. PNNL-SA-124209.  https://doi.org/1029/2018MS001275.
  18. Jones, A.D., K.V. Calvin, X. Shi, A. Di Vittorio, B. Bond-Lamberty, P. Thornton, and W.D. Collins. (2018).  Quantifying Human-Mediated Carbon Cycle Feedbacks. Geophysical Research Letters 45, no. 20:11370-11379.   https://doi.org/1029/2018GL079350.
  19. Leung, L., T.K. Tesfa, Z. Tan, and H. Li. (2018).  Modeling sediment yield in land surface and Earth system models: Model comparison, development and evaluation.  Journal of Advances in Modeling Earth Systems 10, no. 9:2192-2213.  https://doi.org/1029/2017MS001270.
  20. Riley, W. J., Q. Zhu, and J. Y. Tang (2018).  Weaker land–climate feedbacks from nutrient uptake during photosynthesis-inactive periods.  Nat. Clim. Chang., 8, 1002–1006.  https://doi.org/1038/s41558-018-0325-4.
  21. Saravia, L., S. Doyle, and B. Bond-Lamberty (2018).  Power laws and critical fragmentation in global forests. Scientific Reports 8, no. 1:17766.  https://doi.org/1038/s41598-018-36120-w.

 

 

 

 

 

 

Cryosphere Group Publications

Published or In Press

  1. Dang, C., Zender, C. S., and Flanner, M. G. (2019).  Inter-comparison and improvement of two-stream shortwave radiative transfer models in ESMs for a unified treatment of cryospheric surfaces.  The Cryosphere.  https://www.the-cryosphere.net/13/2325/2019.
  2. Hoch, Kristin, Petersen, Mark, Brus, Steven, Engwirda, Darren, Roberts, Andrew, Rosa, Kevin, & Wolfram, Phillip. (2020).  MPAS-Ocean Simulation Quality for Variable-Resolution North American Coastal Meshes.  JAMES, 12, e2019MS001848.  https://doi.org/10.1029/2019MS001848.
  3. Jeong, H., X. S. Asay-Davis, A. K. Turner, D. S. Comeau, S. F. Price, R. P. Abernathey, M. Veneziani, M. R. Petersen, M. J. Hoffman, M. R. Mazloff, and T. D. Ringler (2019).  Impacts of ice-shelf melting on water mass transformation in the Southern Ocean from E3SM simulations. J. Climate.  https://doi.org/10.5281/zenodo.3406735.
  4. Lee, D.Y., Petersen, M.R., Lin, W. (2019). The Southern Annular Mode and Southern Ocean Surface Westerly Winds in E3SM. Earth and Space Science.  https://doi.org/10.1029/2019EA000663.
  5. Petersen, Mark R.; Asay-Davis, Xylar S.; Berres, Anne S.; Chen, Qingshan; Feige, Nils; Hoffman, Matthew J.; Jacobsen, Douglas W.; Jones, Philip W.; Maltrud, Mathew E.; Price, Stephen F.; Ringler, Todd D.; Streletz, Gregory J.; Turner, Adrian K.; Van Roekel, Luke P.; Veneziani, Milena; Wolfe, Jonathan D.; Wolfram, Phillip J.; Woodring, Jonathan L. (2019).  An evaluation of the ocean and sea ice climate of E3SM using MPAS and interannual CORE-II forcing. JAMES.  https://doi.org/10.1029/2018MS001373.
  6. Hoffman, M. J., M. Perego, S. F. Price, W. H. Lipscomb, T. Zhang, D. Jacobsen, I. Tezaur, A. G. Salinger, R. Tuminaro, and L. Bertagna (2018).  MPAS-Albany Land Ice (MALI): a variable-resolution ice sheet model for Earth system modeling using Voronoi grids.  Model Dev., 11, 3747–3780. https://doi.org/10.5194/gmd-11-3747-2018.
  7. Roberts, A. F., Hunke, E. C., Allard, R., Bailey, D. A., Craig, A. P., Lemieux, J.-F., & Turner, M. D. (2018). Quality control for community-based sea-ice model development. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 376(2129), 20170344. https://doi.org/10.1098/rsta.2017.0344

 

 

 

 

 

NGD Atmosphere Physics Publications

Published or In Press

  1. Prather and Hsu (2019).  A Round Earth for Climate Models. PNAS.  https://doi.org/10.1073/pnas.1908198116.
  2. Rasch, Xie et al. (2019).  An overview of Version 1 of DOE E3SM Atmosphere Model (EAMV1).  JAMES special issue, in press. Article ID: jame20932, Article DOI: 10.1029/2019MS001629.  EAM-Atmosphere-overview_accepted.pdf.
  3. Richter et al. (2019).  Improved Simulation of the QBO in E3SMv1. JAMEShttps://doi.org/10.1029/2019MS001763.
  4. Xie, S.Wang, Y.‐C.Lin, W.Ma, H.‐Y.Tang, Q.Tang, S., et al ( 2019).  Improved Diurnal Cycle of Precipitation in E3SM with a Revised Convective Triggering FunctionJournal of Advances in Modeling Earth Systems, 11 https://doi.org/10.1029/2019MS001702.
  5. Zhang, Y., Xie, S., Lin, W., Klein, S. A., Zelinka, M., Ma, P.-L., Rasch P., Qian Y., Tang Q., Ma, H.-Y. (2019).  Evaluation of Clouds in Version 1 of the E3SM Atmosphere Model with Satellite Simulators. Journal of Advances in Modeling Earth Systems.  https://doi.org/10.1029/2018ms001562.
  6. Brown, H., X. Liu, Y. Feng, Y. Jiang, M. Wu, Z. Lu, C. Wu, S. Murphy, and R. Pokhrel (2018).  Radiative forcing and climate impacts of Brown Carbon with the Community Atmosphere Model (CAM5).  Atmos. Chem. Phys., 18, 17745-17768. https://doi.org/10.5194/acp-18-17745-2018.
  7. Paukert, M., Fan, J., Rasch, P. J., Morrison, H., Milbrandt, J. A., Shpund, J., & Khain, A. (2018).  Three-Moment Representation of Rain in a Bulk Microphysics Model.  Journal of Advances in Modeling Earth Systemshttps://doi.org/10.1029/2018ms001512.

 

 

 

 

 

 

NGD Software and Algorithms Publications

Published or In Press

  1. Mahajan, S., Evans, K.J., Kennedy, J.H., Xu, M. and Norman, M.R. (2019).  A Multivariate Approach to Ensure Statistical Reproducibility of Climate Model Simulations. In Proceedings of the Platform for Advanced Scientific Computing Conference (p. 14).  ACM.  https://doi.org/10.1145/3324989.3325724.
  2. Mahajan, S., K Evans, J Kennedy, M Xu, M Norman, and M Branstetter (2019).  Ongoing Solution Reproducibility of Earth System Models as They Progress Toward Exascale Computing.  The International Journal of High Performance Computing Applications 109434201983734.  https://doi.org/10.1177/1094342019837341.

 

 

 

E3SM Phase 1 Publications

Coupled Group Publications

Published or In Press 

  1. Hewitt, H.T., M.J. Bell, E.P. Chassignet, A. Czaja, D. Ferreira, S.M. Griffies, P. Hyder, J.L. McClean, A.L. New, M.J. Roberts (2017).  Will high-resolution global ocean models benefit coupled predictions on short-range to climate timescales? Ocean Modelling, 120:120-136.  https://doi.org/10.1016/j.ocemod.2017.11.002.

 

 

Atmosphere Group Publications

  1. Evans et al. (2019).  Northern Hemisphere blocking in simulations at 25km resolution E3SM atmosphere-land simulations.  JGR Atmospheres.  https://doi.org/10.1029/2018JD028892.
  2. Chen, Y.Wang, H.Singh, B.Ma, P.-L.Rasch, P. J., & Bond, T. C. (2018).  Investigating the linear dependence of direct and indirect radiative forcing on emission of carbonaceous aerosols in a global climate modelJournal of Geophysical Research: Atmospheres12316571672https://doi.org/10.1002/2017JD027244.
  3. Harrop, B.E., P.-L. Ma, P.J. Rasch, R.B. Neale, C. Hannay (2018).  The Role of Convective Gustiness in Reducing Seasonal Precipitation Biases in the Tropical West Pacific. JAMEShttps://doi.org/10.1002/2017MS001157.
  4. MacDonald, A. B., H. Dadashazar, P.Y. Chuang, E. Crosbie, H. Wang, Z. Wang, et al. (2018).  Characteristic vertical profiles of cloud water composition in marine stratocumulus clouds and relationships with precipitation.  Journal of Geophysical Research: Atmospheres, 123, 3704–3723.  https://doi.org/10.1002/2017JD027900.
  5. Mahajan, S. et al. (2018).  Model Resolution-sensitivity of the Simulation of North Atlantic Oscillation Teleconnections to Precipitation Extremes.  JGR. Atmosphere.  https://doi.org/10.1029/2018JD028594.
  6. Niu, H., S. Kang, H. Wang, R. Zhang, X. Lu, Y. Qian, R. Paudyal, S. Wang, X. Shi, and X. Yan (2018).  Seasonal variation and light absorption property of carbonaceous aerosol in a typical glacier region of the southeastern Tibetan Plateau. Atmos. Chem. Phys., 18, 6441-6460.  https://doi.org/10.5194/acp-18-6441-2018.
  7. Qian, Y., H. Wan, B. Yang, J. C. Golaz, B. Harrop, Z. Hou, V. E. Larson, L. R. Leung, G. Lin, W. Lin, P. Ma, H. Ma, P. Rasch, B. Singh, H. Wang, S. Xie, and K. Zhang (2018).  Parametric sensitivity and uncertainty quantification in the version 1 of E3SM Atmosphere Model based on short Perturbed Parameters Ensemble simulations. Journal of Geophysical Research-Atmospheres.  https://doi.org/10.1029/2018JD028927.
  8. Wang, H., C.D. Burleyson, P.-L. Ma, J.D. Fast, and P.J. Rasch (2018).  Using the Atmospheric Radiation Measurement (ARM) Datasets to Evaluate Climate Models in Simulating Diurnal and Seasonal Variations of Tropical Clouds. J. Climate. https://doi.org/10.1175/JCLI-D-17-0362.1.
  9. Ma, P-L., P. J. Rasch, H. Chepfer, D. M. Winker, and S. J. Ghan (2018).  Observational Constraint on Cloud Susceptibility Weakened by Aerosol Retrieval Limitations. Nature Communications. Accepted.
  10. Xie et al. (2018).  Understanding Cloud and Convective Characteristics in Version 1 of the E3SM Atmosphere Model.  JAMES.  https://doi.org/10.1029/2018MS001350.
  11. Mahajan, Salil, Abby Gaddis, Kate Evans, Matt Norman (2017).  Exploring an Ensemble-Based Approach to Atmospheric Climate Modeling and Testing at Scale. Procedia Computer Science,  108, 735-744. https://doi.org/10.1016/j.procs.2017.05.259.
  12. Terai, C. R., P. M. Caldwell, S. A. Klein, Q. Tang, and M. L. Branstetter (2017).  The atmospheric hydrologic cycle in the ACME v0.3 model. Clim. Dyn.  https://doi.org/10.1007/s00382-017-3803-x.
  13. Wan, H., Zhang, K., Rasch, P. J., Singh, B., Chen, X., and Edwards, J. (2017).  A new and inexpensive non-bit-for-bit solution reproducibility test based on time step convergence (TSC1.0).  Geosci. Model Dev., 10, 537-552. https://doi.org/10.5194/gmd-10-537-2017.
  14. Zhang, K., Rasch, P. J., Taylor, M. A., Wan, H., Leung, L.-Y. R., Ma, P.-L., Golaz, J.-C., Wolfe, J., Lin, W., Singh, B., Burrows, S., Yoon, J.-H., Wang, H., Qian, Y., Tang, Q., Caldwell, P., and Xie, S. (2017).  Impact of numerical choices on water conservation in the E3SM Atmosphere Model Version 1 (EAM V1).  Geosci. Model Dev.  https://doi.org/10.5194/gmd-2017-293.
  15. Zhang, Y., S. Xie, et al. (2017).  ARM Cloud Radar Simulator for Global Climate Models – A New Tool for Bridging Field Data and Climate Models.  BAMS,https://doi.org/10.1175/BAMS-D-16-0258.1.

Land Group Publications

  1. Anderson-Teixeira, Wang, McGarvey, Herrmann, Tepley, Bond-Lamberty, and LeBauer (2018).  ForC: A global database of forest carbon stocks and fluxes. Ecology. http://doi.org/10.1002/ecy.2229.
  2. Bisht, G., W. J. Riley, H. Wainwright, B. Dafflon, F. Yuan, and V. E. Romanovsky (2018).  Impacts of microtopographic snow-redistribution and lateral subsurface processes on hydrologic and thermal states in an Arctic polygonal ground ecosystem: a case study using ELM-3D v1.0, Geoscientific Model Development11, 61-76.  http://doi.org/10.5194/gmd-11-61-2018.
  3. Bisht, G., Riley, W. J., Hammond, G. E., & Lorenzetti, D. M. (2018). Development and evaluation of a variably saturated flow model in the global E3SM Land Model (ELM) version 1.0. Geoscientific Model Development, 11(10), 4085–4102. https://doi.org/10.5194/gmd-11-4085-2018
  4. Di Vittorio, A. V., Mao, J., Shi, X., Chini, L., Hurtt, G., & Collins, W. D. (2018).  Quantifying the effects of historical land cover conversion uncertainty on global carbon and climate estimates. Geophysical Research Letters, 45.  http://doi.org/10.1002/2017GL075124
  5. Li, Lawrence, and Bond-Lamberty (2018).  Human impacts on 20th century fire dynamics and implications for global carbon and water trajectories. Global and Planetary Change.  http://doi.org/10.1016/j.gloplacha.2018.01.002
  6. Ricciuto, D., K. Sargsyan and P. Thornton (2018).  The Impact of Parametric Uncertainties on Biogeochemistry in the E3SM Land Model. Journal of Advances in Modeling Earth Systems 10.  https://doi.org/10.1002/2017MS000962.
  7. Tan, Z., L.R. Leung, H.-Y. Li, and T. Tesfa (2018).  Modeling Sediment Yield in Land Surface and Earth System Models: Model Comparison, Development and Evaluation.  JAMES, 10.  https://doi.org/10.1029/2017MS001270.
  8. Tang, J. Y., and Riley, W. J. (2018).  Divergent global carbon cycle predictions resulting from ambiguous numerical interpretation of nitrogen limitation. Earth Interactionshttps://doi.org/10.1175/EI-D-17-0023.1.
  9. Zheng, J., Thornton, P. E., Painter, S. L., Gu, B., Wullschleger, S. D., & Graham, D. E. (2019). Modeling anaerobic soil organic carbon decomposition in Arctic polygon tundra: insights into soil geochemical influences on carbon mineralization. Biogeosciences, 16(3), 663–680. https://doi.org/10.5194/bg-16-663-2019
  10. Butler, Datta, et al. (50 co-authors, including Bond-Lamberty) (2017).  Mapping local and global variability in plant trait distributions. Proceedings of the National Academy of Science 114(51):E10937-E10946. http://doi.org/10.1073/pnas.1708984114.
  11. Duarte, H. F., B. M. Raczka, D. M. Ricciuto, J. C. Lin, C. D. Koven, P. E. Thornton, D. R. Bowling, C. T. Lai, K. J. Bible and J. R. Ehleringer (2017).  Evaluating the Community Land Model (CLM4.5) at a coniferous forest site in northwestern United States using flux and carbon-isotope measurements. Biogeosciences 14(18): 4315-4340.  http://doi.org/10.5194/bg-14-4315-2017.
  12. Fang, Y., L.R. Leung, Z. Duan, M.S. Wigmosta, R. Maxwell, J. Chambers, and J. Tomasella (2017).  Influence of Landscape Heterogeneity on Water Available to Tropical Forests in an Amazonian Catchment and Implications for Modeling Drought Response.  J. Geophys. Res., 122, 8410-8426.  http://doi.org/10.1002/2017JD027066.
  13. Holm, J. A., S. J. Van Bloem, G. R. Larocque, and H. H. Shugart (2017).  Shifts in biomass and productivity for a subtropical dry forest in response to simulated elevated hurricane disturbances.  Environ Res Lett12.  http://doi.org/10.1088/1748-9326/aa583c/pdf.
  14. Leng, G., L.R. Leung, and M. Huang (2017).  Significant Impacts of Irrigation Water Sources and Methods on Modeling Irrigation Effects in the ACME Land Model.  J. Adv. Mod. Earth Syst., 9. http://doi.org/10.1002/2016MS000885.
  15. Li ,F., D. M. Lawrence, and B. Bond-Lamberty (2017).  Impact of Fire on Global Land Surface Air Temperature and Energy Budget for the 20th Century due to Changes within Ecosystems.  Environmental Research Letters. 12(4). 44014.  http://doi.org/10.1088/1748-9326/aa6685/meta.
  16. Liu S., B. Bond-Lamberty, L. R. Boysen, J. D. Ford, A. Fox, K. Gallo, J. Hatfield, G. M. Henebry, T. G. Huntington, Z. Liu, T. R. Loveland, R. J. Norby, T. Sohl, A. L. Steiner, W. Yuan, Z. Zhang, and S. Zhao (2017).  Grand Challenges in Understanding the Interplay of Climate and Land Changes.  Earth Interactions. 21(2). 1–43.  https://doi.org/10.1175/EI-D-16-0012.1.
  17. Luo, X., H. Li, L.R. Leung, T. Tesfa, A.C.V. Getirana, F. Papa, and L.L. Hess (2017).  Modeling Surface Water Dynamics in MOSART-Inundation-v1.0: Impacts of Geomorphological Parameters and River Flow Representation in the Amazon Basin. Geosci. Model Dev., 10, 1233-1259.  https://doi.org/10.5194/gmd-10-1233-2017.
  18. Metcalfe, D. B., D. Ricciuto, S. Palmroth, C. Campbell, V. Hurry, J. Mao, S. G. Keel, S. Linder, X. Shi, T. Näsholm, K. E. A. Ohlsson, M. Blackburn, P. E. Thornton and R. Oren (2017).  Informing climate models with rapid chamber measurements of forest carbon uptake. Global Change Biology 23(5): 2130-2139.  https://doi.org/10.1111/gcb.13451.
  19. Sun, Y., Peng, S., Goll, D. S., Ciais, P., Guenet, B., Guimberteau, M., Hinsinger, P., Janssens, I. A., Peñuelas, J., Piao, S., Poulter, B., Violette, A., Yang, X., Yin, Y. and Zeng, H. (2017).  Diagnosing phosphorus limitations in natural terrestrial ecosystems in carbon cycle models. Earth’s Future, 5: 730–749.  https://doi.org/10.1002/2016EF000472.
  20. Tan, Z., L.R. Leung, H. Li, T. Tesfa, M. Vanmaercke, J. Poesen, X. Zhang, H. Lu, and J. Hartmann (2017).  A Global Data Analysis for Representing Sediment and Particulate Organic Carbon Yield in Earth System Models. Water Resour. Res., 53.  https://doi.org/10.1002/2017WR020806.
  21. Tang, J. Y., and W. J. Riley (2017).  SUPECA kinetics for scaling redox reactions in networks of mixed substrates and consumers and an example application to aerobic soil respiration. Geoscientific Model Development10, 3277-3295.   https://doi.org/10-5194/gmd-10-3277-2017.
  22. Tesfa, T., and L.R. Leung (2017).  Exploring New Topography-based Subgrid Spatial Structures for Improving Land Surface Modeling. Geosci. Model Dev., 10, 873-888.  https://doi.org/10.5194/gmd-10-873-2017.
  23. Thornton, P. E., K. Calvin, A. D. Jones, A. V. D. Vittorio, B. Bond-Lamberty, L. Chini, X. Shi, J. Mao, W. D. Collins, J. Edmonds, A. Thomson, J. Truesdale, A. Craig, M. L. Branstetter and G. Hurtt (2017).  Biospheric feedback effects in a synchronously coupled model of human and Earth systems. Nature Clim. Change 7: 496-500.  https://doi.org/10.1038/nclimate3310.
  24. Voisin, N., M. Hejazi, L.R. Leung, L. Liu, M. Huang, H.-Y. Li, and T. Tesfa (2017).  Effects of Spatially Distributed Sector Water Management on the Redistribution of Water Resources in an Integrated Water Model.  Water Resour. Res., 53, 4253–4270.  https://doi.org/10.1002/2016WR019767.
  25. Wan, W., H.-Y. Li, J. Zhao, A. Mishra, L.R. Leung, M. Hejazi, W. Wei, H. Lu, Z. Deng, and Y. Demissie (2017).  Hydrological Drought in the Anthropocene: Impacts of Local Water Extraction and Reservoir Regulation in the US.  J. Geophys. Res., 122.  https://doi/org/10.1002/2017JD026899.
  26. Wang, D., X. Luo, F. Yuan and N. Podhorszki (2017).  A Data Analysis Framework for Earth System Simulation within an In-Situ Infrastructure.  Journal of Computer and Communications Vol.05 No.14: 10.  https://doi.org/10.4236/jcc.2017.514007.
  27. Wang, D., Y. Pei, O. Hernandez, W. Wu, Z. Yao, Y. Kim, M. Wolfe and R. Kitchen (2017).  Compiler technologies for understanding legacy scientific code: A case study on an ACME land module. Procedia Computer Science 108: 2418-2422.  https://doi.org/10.1016/j.procs.2017.05.264.
  28. Xu, Y., D. Wang, T. Janjusic, W. Wu, Y. Pei and Z. Yao (2017).  A Web-based Visual Analytic Framework for Understanding Large-scale Environmental Models: A Use Case for The Community Land Model. Procedia Computer Science 108: 1731-1740.  https://doi.org/10.1016/j.procs.2017.05.181
  29. Zeng, Z., S. Piao, L. Li, L. Zhou, P. Ciais, Y. Li, X. Lian, P. Friedlingstein, J. Mao, R. Myneni, S. Peng, X. Shi, S. Seneviratne, T. Wang and Y. Wang (2017).  Climate mitigation from vegetation biophysical feedbacks during the past three decades. Nature Climate Change.  https://www.nature.com/articles/nclimate3299.
  30. Zhu, Q., W. J. Riley, and J. Y. Tang (2017).  A new theory of plant-microbe nutrient competition resolves inconsistencies between observations and model predictions, Ecol Appl27, WOS:000398577200013, 875-886. doi: https://doi.org/10.1002/eap.1490.
  31. Brunke, M.A., P. Broxton, J. Pelletier, D. Gochis, P. Hazenberg, D. Lawrence, L.R. Leung, G.-Y. Niu, P. Troch, and X. Zeng (2016).  Implementing and Testing Variable Soil Thickness in the Community Land Model Version 4.5. , J. Clim., 29, 3441-3461. http://doi.org/10.1175/JCLI-D-15-0307.1.
  32. Ghimire, B., W. J. Riley, C. D. Koven, M. Mu, and J. T. Randerson (2016).  Representing leaf and root physiological traits in CLM improves global carbon and nitrogen cycling predictions.  JAMEShttp://doi.org/10.1002/2015MS000538
  33. He, H., D. Wang, Y. Xu and J. Tan (2016).  Data synthesis in the Community Land Model for ecosystem simulation. Journal of Computational Science 13: 83-95.  http://doi.org/10.1016/j.jocs.2016.01.005.
  34. Mao, J., D. M. Ricciuto, P. E. Thornton, J. M. Warren, A. W. King, X. Shi, C. M. Iversen and R. J. Norby (2016).  Evaluating the Community Land Model in a pine stand with shading manipulations and 13CO2 labeling. Biogeosciences 13(3): 641-657.  https://doi.org/10.5194/bg-13/641/2016.
  35. Mao, J., A. Ribes, B. Yan, X. Shi, P. E. Thornton, R. Séférian, P. Ciais, R. B. Myneni, H. Douville, S. Piao, Z. Zhu, R. E. Dickinson, Y. Dai, D. M. Ricciuto, M. Jin, F. M. Hoffman, B. Wang, M. Huang and X. Lian (2016).  Human-induced greening of the northern extratropical land surface. Nature Climate Change 6: 959.  https://doi.org/10.1038/nclimate3056.
  36. Medlyn, B. E., M. G. De Kauwe, S. Zaehle, A. P. Walker, R. A. Duursma, K. Luus, M. Mishurov, B. Pak, B. Smith, Y.-P. Wang, X. Yang, K. Y. Crous, J. E. Drake, T. E. Gimeno, C. A. Macdonald, R. J. Norby, S. A. Power, M. G. Tjoelker and D. S. Ellsworth (2016).  Using models to guide field experiments: a priori predictions for the CO2 response of a nutrient- and water-limited native Eucalypt woodland. Global Change Biology 22(8): 2834-2851.  https://doi.org/10.1111/gcb.13268.
  37. Raczka, B., H. F. Duarte, C. D. Koven, D. Ricciuto, P. E. Thornton, J. C. Lin and D. R. Bowling (2016).  An observational constraint on stomatal function in forests: evaluating coupled carbon and water vapor exchange with carbon isotopes in the Community Land Model (CLM4.5). Biogeosciences 13(18): 5183-5204.  https://doi.org/10.5194/bg-13-5183-2016.
  38. Ren, H., Z. Hou, M. Huang, J. Bao, Y. Sun, T. Tesfa, and L.R. Leung (2016).  Classification of Hydrological Parameter Sensitivity and Evaluation of Parameter Transferability Across 431 US MOPEX Basins. J. Hydrol., 536, 92-108, doi:  https://doi.org/10.1016/j.jhydrol.2016.02.042.
  39. Sun, Y., S. Piao, M. Huang, P. Ciais, Z. Zeng, L. Cheng, X. Li, X. Zhang, J. Mao, S. Peng, B. Poulter, X. Shi, X. Wang, Y.-P. Wang and H. Zeng (2016).  Global patterns and climate drivers of water-use efficiency in terrestrial ecosystems deduced from satellite-based datasets and carbon cycle models. Global Ecology and Biogeography 25(3): 311-323.  https://doi.org/10.1111/geb.12411.
  40. Tang, G., F. Yuan, G. Bisht, G. E. Hammond, P. C. Lichtner, J. Kumar, R. T. Mills, X. Xu, B. Andre, F. M. Hoffman, S. L. Painter and P. E. Thornton (2016).  Addressing numerical challenges in introducing a reactive transport code into a land surface model: a biogeochemical modeling proof-of-concept with CLM–PFLOTRAN 1.0. Geosci. Model Dev. 9(3): 927-946.  https://doi.org/10.5194/gmd-9-927-2016.
  41. Tang, G., J. Zheng, X. Xu, Z. Yang, D. E. Graham, B. Gu, S. L. Painter and P. E. Thornton (2016).  Biogeochemical modeling of CO2 and CH4 production in anoxic Arctic soil microcosms. Biogeosciences 13(17): 5021-5041. https://doi.org/10.5194/bg-13-5021-2016.
  42. Tang, J. Y., and W. J. Riley (2016).  Technical Note: A generic law-of-the-minimum flux limiter for simulating substrate limitation in biogeochemical models. Biogeosciences13, 723-735.  https://doi.org/10.5194/bg-13/723/2016/.
  43. Wang, D., Jens Domke, Jiafu Mao, Xiaoying Shi, Daniel Ricciuto (2016).  A Scalable Framework for the Global Offline Community Land Model Ensemble Simulation. International Journal of Computational Science and Engineering, pp73-85, Vol. 12, No. 1.
  44. Yao, Z., Y. Jia, D. Wang, C. Steed and S. Atchley (2016).  In Situ Data Infrastructure for Scientific Unit Testing Platform. Procedia Computer Science 80: 587-598.  https://doi.org/10.1016/j.procs.2016.05.344.
  45. Zhang, L., J. Mao, X. Shi, D. Ricciuto, H. He, P. Thornton, G. Yu, P. Li, M. Liu, X. Ren, S. Han, Y. Li, J. Yan, Y. Hao and H. Wang (2016).  Evaluation of the Community Land Model simulated carbon and water fluxes against observations over ChinaFLUX sites. Agricultural and Forest Meteorology 226–227: 174-185.  https://doi.org/10.1016/j.agrformet.2016.05.018.
  46. Zhu, Q., W. J. Riley, J. Y. Tang, and C. D. Koven (2016).  Multiple soil nutrient competition between plants, microbes, and mineral surfaces: Model development, parameterization, and example applications in several tropical forests, Biogeosciences13, 341-363.  https://doi.org/10.5194/bg-13-341-2016.
  47. Clark, M. P., Y. Fan, D.M. Lawrence, J.C. Adam, D. Bolster, D.J. Gochis, R.P. Hooper, M. Kumar, L.R. Leung, D.S. Mackay, R.M. Maxwell, C. Shen, S.C. Swenson, and X. Zeng (2015).  Improving the Representation of Hydrologic Processes in Earth System Models. Water Resour. Res., 51, 5929-5956, http://doi.org/10.1002/2015WR017096.
  48. Collins, W. D., A. P. Craig, J. E. Truesdale, A. V. Di Vittorio, A. D. Jones, B. Bond-Lamberty, K.V. Calvin, et al. (2015).  The Integrated Earth System Model Version 1: Formulation and Functionality.  Geoscientific Model Development 8 (7): 2203–19.  http://doi.org/10.5194/gmd-8-2203-2015.
  49. Jones, Andrew D., Katherine V. Calvin, William D. Collins, and James Edmonds (2015).  Accounting for Radiative Forcing From Albedo Change in Future Global Land-Use Scenarios. Climatic Change, April.  http://doi.org/10.1007/s10584-015-1411-5.
  50. Leng, G., M. Huang, Q. Tang, and L.R. Leung (2015).  A Modeling Study of Irrigation Effects on Global Surface and Groundwater Resources Under a Changing Climate.  J. Adv. Model. Earth Sys., 7, 1285-1304,  http://doi.org/10.1002/2015MS000437.
  51. Li, H.-Y., L.R. Leung, A. Getirana, M. Huang, H. Wu, Y. Xu, J. Guo, and N. Voisin (2015).  Evaluating Global Streamflow Simulations by a Physically-Based Routing Model Coupled With the Community Land Model.,  J. Hydrometeor., 16, 948-971.  https://doi.org/10.1175/JHM-D-14-0079.1
  52. Li, H.-Y., L.R. Leung, T. Tesfa, N. Voisin, M. Hejazi, L. Liu, Y. Liu, J. Rice, H. Wu, and X. Yang (2015).  Modeling Stream Temperature in the Anthropocene – An Earth System Modeling Approach.  J. Adv. Mod. Earth Sys., 7, 1661-1679.  https://doi.org/10.1002/2015MS000471.
  53. Reed, S. C., X. Yang and P. E. Thornton (2015).  Incorporating phosphorus cycling into global modeling efforts: a worthwhile, tractable endeavor. New Phytologist 208(2): 324-329.  https://doi.org/10.1111/nph.13521.
  54. Safta, C., D. M. Ricciuto, K. Sargsyan, B. Debusschere, H. N. Najm, M. Williams and P. E. Thornton (2015).  Global sensitivity analysis, probabilistic calibration, and predictive assessment for the data assimilation linked ecosystem carbon model. Geosci. Model Dev. 8(7): 1899-1918.  https://doi.org/10.5194/gmd-8-1899-2015.
  55. Tang, J. Y. (2015).  On the relationships between the Michaelis-Menten kinetics, reverse Michaelis-Menten kinetics, equilibrium chemistry approximation kinetics, and quadratic kinetics, Geoscientific Model Development8, WOS.  https://doi.org/10.5194/gmd-8-3823-2015.
  56. Xu, X., D. Hui, A. W. King, X. Song, P. E. Thornton and L. Zhang (2015).  Convergence of microbial assimilations of soil carbon, nitrogen, phosphorus, and sulfur in terrestrial ecosystems. Scientific Reports 5: 17445.  https://doi.org/10.1038/srep17445.
  57. Zhu, Q., and W. J. Riley (2015).  Improved modeling of soil nitrogen losses, Nature Climate Change5, 705-706.  https://doi.org/10.1038/nclimate2696.
  58. Ali, M., S. Ye, H.-Y. Li, M. Huang, L.R. Leung, A. Fiori, and M. Sivapalan. (2014).  Regionalization of Subsurface Stormflow Parameters of Hydrologic Models: Upscaling From Physically Based Numerical Simulations at Hillslope Scale. J. Hydrol., 519, 683-698.  http://doi.org/10.1016/j.jhydrol.2014.07.018.
  59. Cai, X., Z.-L. Yang, Y. Xia, M. Huang, H. Wei, L.R. Leung, and M. Ek. (2014).  Benchmarking Land Models: Evaluation of Noah, Noah-MP, CLM, and VIC Over CONUS Using the NLDAS Testbed.  J. Geophys. Res., 119, 13,751-13,770,  http://doi.org/10.1002/2014JD022113.
  60. Ye, S., H.-Y. Li, M. Huang, M. Ali, G. Leng, L.R. Leung, S.-W. Wang, and M. Sivapalan (2014).  Regionalization of Subsurface Stormflow Parameters of Hydrologic Models: Derivation From Regional Analysis of Streamflow Recession Curves. J. Hydrol., 519, 670-682.  https://doi.org/10.1016/j.jhydrol.2014.07.017.

Ocean/Ice Group Publications

  1. Hoffman, M., X Asay-Davis, S Price, J Fyke, and M Perego  (2019).  Effect of Subshelf Melt Variability on Sea Level Rise Contribution From Thwaites Glacier, Antarctica.  Journal of Geophysical Research: Earth Surface.   https://doi.org/10.1029/2019jf005155.
  2. Lee, D., M.R. Petersen, and W. Lin.  (2019).  The Southern Annular Mode and Southern Ocean Surface Westerly Winds in E3SM.  Earth and Space Science 6: 1-20.   https://doi.org/10.1029/2019ea000663.
  3. Delman, A.S., J.L. McClean, J. Sprintall, L.D. Talley, F.O. Bryan (2018).  Process-specific contributions to anomalous Java mixed layer cooling during positive IOD events. Journal of Geophysical Research- Oceans.  https://doi.org/10.1029/2017CJ013749.
  4. Fyke, J., O. Sergienko, J. Lenaerts, M. Loverstrom, S. Price (2018).  An overview of interactions and feedbacks between ice sheets and the Earth system. Reviews of Geophysics.  https://doi.org/10.1029/2018RG000600 (in press).
  5. Hoffman, M. J., Perego, M., Price, S. F., Lipscomb, W. H., Jacobsen, D., Tezaur, I., Salinger, A. G., Tuminaro, R. and Zhang, T. (2018).  MPAS-Albany Land Ice (MALI): A variable resolution ice sheet model for Earth system modeling using Voronoi grids, Geosci. Model Dev. Discuss., 1–47. https://doi.org/10.5194/gmd-11-3747-2018.
  6. Larios, A., Petersen, M.R., Titi, E.S. et al. (2018).  A computational investigation of the finite-time blow-up of the 3D incompressible Euler equations based on the Voigt regularization. Theor. Comput. Fluid Dyn. 32: 23.  https://doi.org/10.1007/s00162-017-0434-0.
  7. Turner, A. K, Lipscomb, W. H., Hunke, E. C., Jacobsen, D. W., Jeffery, N., Ringler, T. D., Wolfe, J. D. (2018).  MPAS-Seaice: a new variable resolution sea-ice model. Journal of Advances in Modeling Earth Systems.   https://doi.org/10.5281/zenodo.1194373.
  8. Van Roekel, L., A. J. Adcroft, G. Danabasoglu, S. M. Griffies, B. Kauffman, W. Large, M. Levy, B. G. Reichl, T. Ringler, and M. Schmidt (2018).  The KPP boundary layer scheme for the ocean: Revisiting its formulation and benchmarking one-dimensional simulations relative to LES.  JAMES10(11), 2647–2685.  https://doi.org/10.1029/2018MS001336.
  9. Asay-Davis, X.S., Jourdain, N.C., Nakayama, Y. (2017).  Developments in Simulating and Parameterizing Interactions Between the Southern Ocean and the Antarctic Ice Sheet. Curr Clim Change Rep 3, 316–329.  https://doi.org/10.1007/s40641-017-0071-0.
  10. Berres, Anne S., Terece L. Turton, Mark Petersen, David H. Rogers, and James P. Ahrens (2017).  Video Compression for Ocean Simulation Image Databases. In Karsten Rink, Ariane Middel, Dirk Zeckzer, and Roxana Bujack, editors, Workshop on Visualisation in Environmental Sciences (EnvirVis). The Eurographics Associationhttps://doi.org/10.2312/envirvis.20171104.
  11. Centurioni, LR, V. Hormann, L.D. Talley, I. Arzeno, L. Beal, M. Caruso, P. Conroy, R. Echols, H.J.S Fernando, S.N. Giddings, A. Gordon, H. Graber, R. Harcourt, S.R. Jayne, T.G. Jensen, C.M. Lee, P.F.J. Lermusiaux, L’Hegaret, A.J. Lucas, A. Mahadevan, J.L. McClean, G. Pawlak, L. Rainville, S. Riser, H. Seo, A. Y. Shcherbina, E. Skyllingstad, J. Sprintall, B. Subrahmanyan, E. Terrill, R.E. Todd, C. Trott, H.N. Ulloa, H. Wang (2017).  Northern Arabian Sea Circulation – Autonomous Research (NASCar): a research initiative based on autonomous sensors. Oceanography, 30(2):74-87.  https://doi.org/10.5670/oceanog.2017.224.
  12. Chen, R., S. T. Gille, and J.L. McClean (2017).  Isopycnal eddy mixing across the Kuroshio Extension: Stable versus unstable states in an eddying model, Journal of Geophysical Research: Oceans, 122, 4329–4345. https://doi.org/10.1002/2016JC012164.
  13. Lee, D., Palha, A. and Gerritsma, M. (2017).  Discrete conservation properties for shallow water flows using mixed mimetic spectral elements. Journal of Computational Physicshttp://doi.org/10.1016/j.jcp.2017.12.022.
  14. Ringler, T., Saenz, J.A., Wolfram, P.J. and Van Roekel, L. (2017).  A thickness-weighted average perspective of force balance in an idealized circumpolar current. Journal of Physical Oceanography47(2), pp.285-302.  https://doi.org/10.1175/JPO-D-16-0096.1.
  15. Urrego‐Blanco, J.R., Hunke, E.C., Urban, N.M., Jeffery, N., Turner, A.K., Langenbrunner, J.R. and Booker, J.M. (2017).  Validation of sea ice models using an uncertainty‐based distance metric for multiple model variables. Journal of Geophysical Research: Oceans122(4), pp.2923-2944.  https://doi.org/10.1002/2016JC012602.
  16. Van Sebille, Erik, et al. (2017).  Lagrangian ocean analysis: fundamentals and practices. Ocean Modelling.  https://doi.org/10.1016/j.ocemod.2017.11.008.
  17. Wang, S., S. Elliott, M. Maltrud, and P. Cameron-Smith (2017).  Influence of dimethyl sulfide on marine ecosystems and the global carbon cycle. Journal of Geophysical Research, Biogeosciences.  https://doi.org/10.1002/2015JG003017.
  18. Wolfram, P.J. and Ringler, T.D. (2017).  Quantifying residual, eddy, and mean flow effects on mixing in an idealized circumpolar current.  Journal of Physical Oceanography47(8), 1897-1920.  https://doi.org/10.1175/JPO-D-16-0101.1.
  19. Wolfram, P.J. and Ringler, T.D. (2017).  Computing eddy-driven effective diffusivity using Lagrangian particles. Ocean Modelling118, pp.94-106.  https://doi.org/10.1016/j.ocemod.2017.08.008.
  20. Asay-Davis, X.S., Cornford, S.L., Galton-Fenzi, B.K., Gladstone, R.M., Gudmundsson, G.H., Holland, D.M., Holland, P.R. and Martin, D.F. (2016). Experimental design for three interrelated marine ice sheet and ocean model intercomparison projects: MISMIP v. 3 (MISMIP+), ISOMIP v. 2 (ISOMIP+) and MISOMIP v. 1 (MISOMIP1). Geoscientific Model Development9(7), p.2471.  https://doi.org/10.5194/gmd-9-2471-2016.
  21. Burrows, S.M., Gobrogge, E., Fu, L., Link, K., Elliott, S.M., Wang, H. and Walker, R. (2016).  OCEANFILMS‐2: Representing coadsorption of saccharides in marine films and potential impacts on modeled marine aerosol chemistry. Geophysical Research Letters43(15), pp.8306-8313.  https://doi.org/10.1002/2016GL069070.
  22. Dinniman, M.S., Asay-Davis, X.S., Galton-Fenzi, B.K., Holland, P.R., Jenkins, A. and Timmermann, R. (2016).  Modeling ice shelf/ocean interaction in Antarctica: A review. Oceanography29(4), pp.144-153.  https://doi.org/10.5670/oceanog.2016.106.
  23. Ware, C., Rogers, D., Petersen, M., Ahrens, J., and Aygar, E. (2016).  Optimizing for Visual Cognition in High Performance Scientific Computing. Electronic Imaging 2016.16, pp. 1–9.  https://doi.org/10.2352/ISSN.2470-1173.2016.16.HVEI-130.
  24. Woodring, J., Petersen, M., Schmeisser, A., Patchett, J., Ahrens, J., Hagen, H. (2016).  In Situ Eddy Analysis in a High-Resolution Ocean Climate Model.  Visualization and Computer Graphics, IEEE Transactions on , vol.22, no.1, pp.857-866.  https://doi.org/10.1109/TVCG.2015.2467411.
  25. Xu, L., Cameron‐Smith, P., Russell, L.M., Ghan, S.J., Liu, Y., Elliott, S., Yang, Y., Lou, S., Lamjiri, M.A. and Manizza, M. (2016).  DMS role in ENSO cycle in the tropics. Journal of Geophysical Research: Atmospheres121(22). doi: https://doi.org/10.1002/2016JD025333.
  26. Woodring, J., Petersen, M., Schmeisser, A., Patchett, J., Ahrens, J., Hagen, H. (2016).  In Situ Eddy Analysis in a High-Resolution Ocean Climate Model.  Visualization and Computer Graphics, IEEE Transactions on , vol.22, no.1, pp.857-866.  https://doi.org/10.1109/TVCG.2015.2467411.
  27. Xu, L., Cameron‐Smith, P., Russell, L.M., Ghan, S.J., Liu, Y., Elliott, S., Yang, Y., Lou, S., Lamjiri, M.A. and Manizza, M. (2016).  DMS role in ENSO cycle in the tropics. Journal of Geophysical Research: Atmospheres121(22). doi: https://doi.org/10.1002/2016JD025333.
  28. Petersen, M.R., D.W. Jacobsen, T.D. Ringler, M.W. Hecht, M.E. Maltrud (2015).  Evaluation of the arbitrary Lagrangian–Eulerian vertical coordinate method in the MPAS-Ocean model. Ocean Modelling, Volume 86, February 2015, Pages 93-113, ISSN 1463-5003.  https://doi.org.10.1016/j.ocemod.2014.12.004.
  29. Reckinger, S., Petersen, M.R., Reckinger, S.J. (2015).  A study of overflow simulations using MPAS-Ocean: Vertical grids, resolution, and viscosity. Ocean Modelling, Volume 96, Part 2, 291-313, ISSN 1463-5003.  https://doi.og/10.1016/j.ocemod.2015.09.006.
  30. Samsel F., M. Petersen, G. Abram, T. L. Turton, D. Rogers, and J. Ahrens (2015).  Visualization of ocean currents and eddies in a high-resolution global ocean-climate model.  Proceedings of the International Conference on High Performance Computing, Networking, Storage and Analysishttps://doi.org/10.1002/2015JG003017.
  31. Samsel F., Mark Petersen, Terece Geld, Greg Abram, Joanne Wendelberger, James Ahrens (2015).  Colormaps That Improve Perception of High-Resolution Ocean Data.  https://doi.org/10.1145/2702613.2702975.
  32. Wolfram, Phillip J., et al. (2015).  Diagnosing isopycnal diffusivity in an eddying, idealized midlatitude ocean basin via Lagrangian, in Situ, Global, High-Performance Particle Tracking (LIGHT).  Journal of Physical Oceanography 45.8. 2114-2133.  https://doi.org/10.1175/JPO-D-14-0260.1.

Workflow Group Publications

  1.  Wang, W., C. S. Zender, D. van As, and N. B. Miller (2019).  Spatial distribution of melt-season cloud radiative effects over Greenland: Evaluating satellite observations, reanalyses, and model simulations against in situ measurements,  J. Geophys. Res. Atm.124, doi:10.1029/2018JD028919.
  2. Wang, W., C. S. Zender, and D. van As (2018).  Temporal Characteristics of Cloud Radiative Effects on the Greenland Ice Sheet: Discoveries from Multiyear Automatic Weather Station Measurements, J. Geophys. Res. Atm.123, doi:10.1029/2018JD028540.
  3. Gorris, M. E., L. A. Cat, C. S. Zender, K. K. Treseder, and J. T. Randerson (2018).  Coccidioidomycosis dynamics in relation to climate in the southwestern United States. AGU,2(1), 6-24.  https://doi.org/10.1002/2017GH000095 .
  4. Munneke, P. K., A. J. Luckman, S. L. Bevan, C. J. P. P. Smeets, E. Gilbert, M. R. van den Broeke, W. Wang, C. S. Zender, B. Hubbard, D. Ashmore, A. Orr, and J. C. King (2018).  Intense winter surface melt on an Antarctic ice shelf. Geophys. Res. Letthttps://doi.org/10.1029/2018GL077899.
  5. Parajuli, S. P., and C. S. Zender (2017).  Connecting geomorphology to dust emission through high-resolution mapping of global land cover and sediment supply. Aeolian Research, 27, 47-65.  https://doi.org/10.1016/j.aeolia.2017.06.002.
  6. Silver, J. D. and Zender, C. S. (2017).  The compression-error trade-off for large gridded datasets. Geosci. Model Dev., 10, 413-423.  https://doi.org/10.5194/gmd-10-413-2017.
  7. Stephan E., B. Raju, T. Elsethagen, L. Pouchard and C. Gamboa (2017).  A scientific data provenance harvester for distributed applications. 2017 New York Scientific Data Summit (NYSDS), New York, NY, 2017, pp. 1-9.  https://doi.org/10.1109/NYSDS.2017.8085041.
  8. Williams, Dean N., et al. (2017).  U.S. DOE. 6th Annual Earth System Grid Federation Face-to-Face Conference Report. DOE/SC-0188. U.S. Department of Energy Office of Science, March 2017.  https://doi.org/10.2172/1369382.
  9. Elsethagen, T. O., Stephan, E. G., Raju, B., Schram, M., Macduff, M. C., Kerbyson, D. J., Kleese-Van Dam, K., Singh, A., Altintas, I.  (2016).  Data Provenance Hybridization Supporting Extreme-Scale Scientific WorkflowApplications.  NYSDS 2016 – Data Driven Discovery.
  10. Gleckler, P. J., C. Doutriaux, P. J. Durack, K. E. Taylor, Y. Zhang, and D. N. Williams, E. Mason, and J. Servonnat (2016).  A more powerful reality test for climate models. Eos, 97.  https://doi.org/10.1029/2016EO051663.
  11. Harris, Matthew B., Sam B. Fries, Dean N. Williams, Sterling A. Baldwin, James W. Crean, Bryce J. Sampson, Edward M. Brown, Anna Paula M. Pawlicka (2016).  The Legend of CDAT: A Link to the Past.  http://www.iaeng.org/publication/WCECS2016/WCECS2016_pp181-184.pdf.
  12. McEnerney, J. , Ames, S. , Christensen, C. , Doutriaux, C. , Hoang, T. , Painter, J. , Smith, B. , Shaheen, Z. and Williams, D. (2016).  Parallelization of Diagnostics for Climate Model Development. Journal of Software Engineering and Applications, 9, 199-207.  https://doi.org/10.4236/jsea.2016.95016.
  13. Raju,B., Elsethagen, T. O., Stephan, E. G., Kleese van Dam, K. (2016).  A Scientific Data Provenance API for Distributed Applications.  The 6th International Workshop on Semantic Technologies for Information-Integrated Collaboration.
  14. Sterling A. Baldwin, Matthew B. Harris, Samuel B. Fries (2016). Science as a Service,  Proceedings of The World Congress on Engineering and Computer Science (2016).  Vol. I, WCECS 2016, 21-23 October, 2016, San Francisco, USA, pp123-126.   http://www.iaeng.org/publication/WCECS2015/ ISBN: 978-988-19253-6-7.
  15. Thomas, M., Laskin, J., Raju, B., Stephan, E. G., Elsethagen, T. O., Van, N.Y.S, Nguyen, S. N. (2016).  Enabling Re-executable Workflows with Near-real-time Visualization, Provenance Capture and Advanced Querying for Mass Spectrometry Data.  NYSDS 2016 – Data-Driven Discovery.
  16. U.S. DOE. 2016. Working Group on Virtual Data Integration (2016).  A Report from the August 13–14, 2015, Workshop. DOE/SC-0180. U.S. Department of Energy Office of Science.  https://doi.org/10.2172/1227017.
  17. Wang, W., Zender, C. S., van As, D., Smeets, P. C. J. P., and van den Broeke, M. R.(2016).  A Retrospective, Iterative, Geometry-Based (RIGB) tilt-correction method for radiation observed by automatic weather stations on snow-covered surfaces: application to Greenland. The Cryosphere, 10, 727-741.  https://doi.org/10.5194/tc-10-727-2016.
  18. Williams, D. N. (2016).  Better tools to build better climate models. Cover of Eos, 97.  https://doi.org/10.1029/2016EO045055.
  19. Williams, Dean N., V. Balaji, Luca Cinquini, Sébastien Denvil, Daniel Duffy, Ben Evans, Robert Ferraro, Rose Hansen, Michael Lautenschlager, and Claire Trenham (2016).  A Global Repository for Planet-Sized Experiments and Observations. Bulletin of the American Meteorological Society, June 2016.  https://doi.org/10.1175/BAMS-D-15-00132.1
  20. Williams, Dean N., Charles Doutriaux, Aashish Chaudhary, Sam Fries, Dan Lipsa, Sankhesh Jhaveri, Paul J. Durack, Jeffrey Painter, Denis Nadeau, Thomas Maxwell, Matthew Harris and Jonathan Beezley (2016).  UV-CDAT, 2016.  https://doi.org/10.5281/zenodo.45136.
  21. Williams, Dean N. (2016).  5th Annual Earth System Grid Federation and Observations. LLNL Technical Report #LLNL-TR-689917, April 2016, https://e-reports-ext.llnl.gov/pdf/806992.pdf.   https://doi.org.10.2172/1182238.
  22. Williams, Dean N., et al. (2016).  U.S. DOE. 2016. 5th Annual Earth System Grid Federation Face-to-Face Conference Report. DOE/SC-0181. U.S. Department of Energy Office of Science., March 2016.  https://doi.org.10.2172/1253685.
  23. Zender, C. S. (2016).  Bit Grooming: statistically accurate precision-preserving quantization with compression, evaluated in the netCDF Operators (NCO, v4.4.8+). Geosci. Model Dev, 9, 3199-3211. https://doi.org.10.5194/gmd-9-3199-2016.
  24. Steed, Chad A., Katherine J. Evans, John F. Harney, Brian C. Jewell, Galen Shipman, Brian E. Smith, Peter E. Thornton, and Dean N. Williams (2014).  Web-based Visual Analytics for Extreme Scale Climate ScienceBig Data (Big Data), 2014. IEEE International Conference on 2014 pp 383 – 392.  https://doi.org/10.1109/BigData.2014.7004255.
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